RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ZNF687Q8N1G0 1237 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 FBXO15Q8NCQ5 510 aaPredicted RBP11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 PAPD5Q8NDF8 572 aaKnown RBP11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 ZNF740Q8NDX6 193 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 HUS1BQ8NHY5 278 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 EXOSC8Q96B26 276 aaKnown RBP11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 PPM1MQ96MI6 270 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 TMEM79Q9BSE2 394 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 RAD21L1Q9H4I0 556 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 GPRC5BQ9NZH0 403 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 TMED5Q9Y3A6 229 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 SZT2Q5T011 3432 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 PCDH7O60245 1069 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 ACADLP28330 430 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 IL1RL1Q01638 556 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 C11orf91Q3C1V1 193 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 TTC33Q6PID6 262 aaPredicted RBP11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 DLEU7Q6UYE1 221 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 C19orf47Q8N9M1 422 aaKnown RBP11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 FIG4Q92562 907 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 NELL1Q92832 810 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 SEPHS2Q99611 448 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 NRTNQ99748 197 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 CIB1Q99828 191 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 ACTR3BQ9P1U1 418 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 CORO2BQ9UQ03 480 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 MAU2Q9Y6X3 613 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 SAC3D1A6NKF1 404 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 MAGEB17A8MXT2 336 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 FKBP9O95302 570 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 ETS2P15036 469 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 HTR6P50406 440 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 RAD23AP54725 363 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 KCNAB1Q14722 419 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 RABL3Q5HYI8 236 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 MAML2Q8IZL2 1156 aaPredicted RBP11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 TFAP2CQ92754 450 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 FCRL4Q96PJ5 515 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 OR6C1Q96RD1 312 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 ANKRD60Q9BZ19 345 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 ADGRE2Q9UHX3 823 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 BTBD3Q9Y2F9 522 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 SMIM31A0A1B0GVY4 71 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 CDC123O75794 336 aaPredicted RBP11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 HSD11B2P80365 405 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 CSRP2Q16527 193 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 TCTE1Q5JU00 501 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 ANXA8L1Q5VT79 327 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 PPP1R3BQ86XI6 285 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 SPPL2CQ8IUH8 684 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 DHRSXQ8N5I4 330 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 OR7G3Q8NG95 312 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 LZICQ8WZA0 190 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 ROGDIQ9GZN7 287 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 EGFL7Q9UHF1 273 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 SNX5Q9Y5X3 404 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 ZNF780BQ9Y6R6 833 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 TRIM64CA6NLI5 447 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 LSM1O15116 133 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 ARPC2O15144 300 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 RFPL3O75679 317 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 IFNA14P01570 189 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 NTRK1P04629 796 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 ST6GAL1P15907 406 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 CHI3L1P36222 383 aaPredicted RBP11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 FOXD4Q12950 439 aaPredicted RBP11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 TRAF3Q13114 568 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 R3HCC1LQ7Z5L2 792 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 OR2T12Q8NG77 320 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 SAP25Q8TEE9 199 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 DEPDC7Q96QD5 511 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 RUVBL1Q9Y265 456 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 TNFSF14O43557 240 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 ERN1O75460 977 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 PDYNP01213 254 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 RPL5P46777 297 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 SRSF11Q05519 484 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 PWP1Q13610 501 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 HLA-DQA1Q5Y7H0 255 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 GLYATQ6IB77 296 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 ZFP28Q8NHY6 868 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 WDR48Q8TAF3 677 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 PPCDCQ96CD2 204 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 MRPS26Q9BYN8 205 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 PIF1Q9H611 641 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 ANKMY1Q9P2S6 941 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 OTOGLQ3ZCN5 2332 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 LILRA5A6NI73 299 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 NPPBP16860 134 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 KIR3DL1P43629 444 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 GPR3P46089 330 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 LRRC74AQ0VAA2 488 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 FOXC1Q12948 553 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 ZXDCQ2QGD7 858 aaPredicted RBP11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 C10orf62Q5T681 223 aaPredicted RBP11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 INTS11Q5TA45 600 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 TCTN2Q96GX1 697 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 SEMA6CQ9H3T2 930 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 PELI2Q9HAT8 420 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 ZNF639Q9UID6 485 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms