RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 NCLNQ969V3 563 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 REPS1Q96D71 796 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 GPR137Q96N19 417 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 GPR78Q96P69 363 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 FMO2Q99518 471 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 MAPKAP1Q9BPZ7 522 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 CENPKQ9BS16 269 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 OR51B5Q9H339 312 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 VTI1BQ9UEU0 232 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 TSC22D4Q9Y3Q8 395 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 PCDHGA11Q9Y5H2 935 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 CLCA3PQ9Y6N3 262 aa10.11□□□□□ -0.79
SSBP4-215ENST00000625926 NBASA2RRP1 2371 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 ENO4A6NNW6 628 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 NPIPA5E9PKD4 350 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 H0YIV9 168 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 KLRC4-KLRK1H3BQV0 150 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 KIF2AO00139 706 aaPredicted RBP10.1□□□□□ -0.79
SSBP4-215ENST00000625926 SAP18O00422 153 aaKnown RBP10.1□□□□□ -0.79
SSBP4-215ENST00000625926 NME2P1O60361 137 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 UGDHO60701 494 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 ZG16O60844 167 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 ITGA10O75578 1167 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 NME2P22392 152 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 CPN2P22792 545 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 PTX3P26022 381 aaPredicted RBP10.1□□□□□ -0.79
SSBP4-215ENST00000625926 COL8A1P27658 744 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 SSR2P43308 183 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 SSR4P51571 173 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 RAP1GDS1P52306 607 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 ARFIP1P53367 373 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 CASP6P55212 293 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 PHEXP78562 749 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 SLAMF1Q13291 335 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 DDX39BQ13838 428 aaKnown RBP10.1□□□□□ -0.79
SSBP4-215ENST00000625926 GTF2H2Q13888 395 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 UBAP2Q5T6F2 1119 aaKnown RBP10.1□□□□□ -0.79
SSBP4-215ENST00000625926 GTF2H2CQ6P1K8 395 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 TAOK1Q7L7X3 1001 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 ZNF227Q86WZ6 799 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 MORN4Q8NDC4 146 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 OR14A16Q8NHC5 309 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 PTPMT1Q8WUK0 201 aaPredicted RBP10.1□□□□□ -0.79
SSBP4-215ENST00000625926 RGMAQ96B86 450 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 FRMD6Q96NE9 622 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 PAFAH2Q99487 392 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 MTERF1Q99551 399 aaKnown RBP10.1□□□□□ -0.79
SSBP4-215ENST00000625926 IPPKQ9H8X2 491 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 MS4A12Q9NXJ0 267 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 CPSF2Q9P2I0 782 aaKnown RBP10.1□□□□□ -0.79
SSBP4-215ENST00000625926 SUCOQ9UBS9 1254 aaKnown RBP10.1□□□□□ -0.79
SSBP4-215ENST00000625926 ZNF223Q9UK11 482 aaPredicted RBP10.1□□□□□ -0.79
SSBP4-215ENST00000625926 NPIPA1Q9UND3 350 aa10.1□□□□□ -0.79
SSBP4-215ENST00000625926 YARS2Q9Y2Z4 477 aaKnown RBP10.1□□□□□ -0.79
SSBP4-215ENST00000625926 SPENQ96T58 3664 aaKnown RBP10.09□□□□□ -0.79
SSBP4-215ENST00000625926 A0A087WUV0 522 aaPredicted RBP10.09□□□□□ -0.79
SSBP4-215ENST00000625926 MYOCOSA0A1B0GUC4 107 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 LRRC14BA6NHZ5 514 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 POC1B-GALNT4F8VUJ3 575 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 CCL21O00585 134 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 ASNA1O43681 348 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 SLC19A2O60779 497 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 LDB3O75112 727 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 WISP2O76076 250 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 CLDN9O95484 217 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 COL6A2P12110 1019 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 ZNF24P17028 368 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 CNTFP26441 200 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 ECHS1P30084 290 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 TLX1P31314 330 aaPredicted RBP10.09□□□□□ -0.79
SSBP4-215ENST00000625926 CA7P43166 264 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 MAGEA12P43365 314 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 RIPPLY3P57055 190 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 BIKQ13323 160 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 CPSF6Q16630 551 aaKnown RBP eCLIP10.09□□□□□ -0.79
SSBP4-215ENST00000625926 TSNAXIP1Q2TAA8 658 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 TECRLQ5HYJ1 363 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 MTFR2Q6P444 385 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 HSDL2Q6YN16 418 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 GOLGA7Q7Z5G4 137 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 GPR180Q86V85 440 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 GPALPP1Q8IXQ4 340 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 PLD6Q8N2A8 252 aaKnown RBP10.09□□□□□ -0.79
SSBP4-215ENST00000625926 ZCCHC7Q8N3Z6 543 aaKnown RBP10.09□□□□□ -0.79
SSBP4-215ENST00000625926 RNF175Q8N4F7 328 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 PTGR2Q8N8N7 351 aaPredicted RBP10.09□□□□□ -0.79
SSBP4-215ENST00000625926 L3MBTL4Q8NA19 623 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 POGLUT1Q8NBL1 392 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 KIF18AQ8NI77 898 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 ATP6V1E2Q96A05 226 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 ISL2Q96A47 359 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 RBM18Q96H35 190 aaKnown RBP10.09□□□□□ -0.79
SSBP4-215ENST00000625926 SORBS1Q9BX66 1292 aaKnown RBP10.09□□□□□ -0.79
SSBP4-215ENST00000625926 TSPAN10Q9H1Z9 355 aaPredicted RBP10.09□□□□□ -0.79
SSBP4-215ENST00000625926 DMRT3Q9NQL9 472 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 ZNF358Q9NW07 568 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 PSD3Q9NYI0 1048 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 ZNF180Q9UJW8 692 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 TMCO1Q9UM00 188 aa10.09□□□□□ -0.79
SSBP4-215ENST00000625926 KLF13Q9Y2Y9 288 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms