RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 RFTN2Q52LD8 501 aaPredicted RBP2.12□□□□□ -2.07
CHD2-203ENST00000625243 B3GLCTQ6Y288 498 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 TMEM64Q6YI46 380 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 C3P1Q6ZMU1 363 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 KIF6Q6ZMV9 814 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 C17orf64Q86WR6 236 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 TBC1D10CQ8IV04 446 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 TDHQ8IZJ6 230 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 FBXL16Q8N461 479 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 RTL3Q8N8U3 475 aaKnown RBP2.12□□□□□ -2.07
CHD2-203ENST00000625243 GPATCH11Q8N954 259 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 CLEC1AQ8NC01 280 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 TRPV3Q8NET8 790 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 NEK11Q8NG66 645 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 OR52B6Q8NGF0 335 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 OR5M9Q8NGP3 310 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 SPPL2AQ8TCT8 520 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 U2AF1L4Q8WU68 220 aaKnown RBP2.12□□□□□ -2.07
CHD2-203ENST00000625243 UBTD2Q8WUN7 234 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 GTF3AQ92664 365 aaKnown RBP2.12□□□□□ -2.07
CHD2-203ENST00000625243 BCL2L2Q92843 193 aaPredicted RBP2.12□□□□□ -2.07
CHD2-203ENST00000625243 ZNF560Q96MR9 790 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 ANKRD27Q96NW4 1050 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 ZNF300Q96RE9 604 aaPredicted RBP2.12□□□□□ -2.07
CHD2-203ENST00000625243 ATP6V0BQ99437 205 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 VGLL1Q99990 258 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 MCRIP2Q9BUT9 160 aaKnown RBP2.12□□□□□ -2.07
CHD2-203ENST00000625243 TEX13AQ9BXU3 409 aaPredicted RBP2.12□□□□□ -2.07
CHD2-203ENST00000625243 ABCG4Q9H172 646 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 TRPV6Q9H1D0 765 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 GANQ9H2C0 597 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 THAP9Q9H5L6 903 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 S100A14Q9HCY8 104 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 HOMER3Q9NSC5 361 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 NDE1Q9NXR1 346 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 CACNG5Q9UF02 275 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 FOXA2Q9Y261 457 aaPredicted RBP2.12□□□□□ -2.07
CHD2-203ENST00000625243 MRPS2Q9Y399 296 aaKnown RBP2.12□□□□□ -2.07
CHD2-203ENST00000625243 NEDD4P46934 1319 aa2.12□□□□□ -2.07
CHD2-203ENST00000625243 ATP6AP2A0A1C7CYW4 349 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 GTPBP10A4D1E9 387 aaKnown RBP2.11□□□□□ -2.07
CHD2-203ENST00000625243 SLC15A5A6NIM6 579 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 ASB14A6NK59 587 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 YJEFN3A6XGL0 299 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 MPTX1A8MV57 137 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 EEF2KO00418 725 aaKnown RBP2.11□□□□□ -2.07
CHD2-203ENST00000625243 CHUKO15111 745 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 P2RX6O15547 441 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 MLNRO43193 412 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 DCXO43602 365 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 KIAA0513O60268 411 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 ECE2O60344 883 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 OR6A2O95222 327 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 CPNE6O95741 557 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 OLFM2O95897 454 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 MT-ND3P03897 115 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 APRTP07741 180 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 HIST1H2AGP0C0S8 130 aaPredicted RBP2.11□□□□□ -2.07
CHD2-203ENST00000625243 ODC1P11926 461 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 EZRP15311 586 aaKnown RBP2.11□□□□□ -2.07
CHD2-203ENST00000625243 DPEP1P16444 411 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 NUMBP49757 651 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 NDST2P52849 883 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 CCZ1BP86790 482 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 CCZ1P86791 482 aaPredicted RBP2.11□□□□□ -2.07
CHD2-203ENST00000625243 RBBP4Q09028 425 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 WASHC5Q12768 1159 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 ELAVL2Q12926 359 aaKnown RBP2.11□□□□□ -2.07
CHD2-203ENST00000625243 GPR50Q13585 617 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 MTF1Q14872 753 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 KRT31Q15323 416 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 CARTPTQ16568 116 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 MS4A18Q3C1V0 323 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 SPANXN4Q5MJ08 99 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 SLC10A5Q5PT55 438 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 HIST2H2AA3Q6FI13 130 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 METTL7BQ6UX53 244 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 ZNF410Q86VK4 478 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.11□□□□□ -2.07
CHD2-203ENST00000625243 CNTN4Q8IWV2 1026 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 ZC3H3Q8IXZ2 948 aaKnown RBP2.11□□□□□ -2.07
CHD2-203ENST00000625243 CHCHD4Q8N4Q1 142 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 CCDC197Q8NCU1 140 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 OR9Q2Q8NGE9 314 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 C8orf46Q8TAG6 207 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 GOLGA5Q8TBA6 731 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 PCNPQ8WW12 178 aaKnown RBP2.11□□□□□ -2.07
CHD2-203ENST00000625243 SMPDL3AQ92484 453 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 HIST1H2ACQ93077 130 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 FAM46BQ96A09 425 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 POM121L2Q96KW2 1035 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 NSMCE3Q96MG7 304 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 ALKBH3Q96Q83 286 aaPredicted RBP2.11□□□□□ -2.07
CHD2-203ENST00000625243 ERGIC2Q96RQ1 377 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 RUFY1Q96T51 708 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 S1PR3Q99500 378 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 LGMNQ99538 433 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 DDX50Q9BQ39 737 aaKnown RBP2.11□□□□□ -2.07
CHD2-203ENST00000625243 OVOL2Q9BRP0 275 aa2.11□□□□□ -2.07
CHD2-203ENST00000625243 SYT11Q9BT88 431 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms