RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 MED25Q71SY5 747 aa18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 IL22RA1Q8N6P7 574 aa18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 OR51Q1Q8NH59 317 aa18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 ADAMTS18Q8TE60 1221 aa18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 C16orf78Q8WTQ4 265 aa18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 TM4SF18Q96CE8 201 aa18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 MAPKAP1Q9BPZ7 522 aa18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 MYNNQ9NPC7 610 aa18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 HCN3Q9P1Z3 774 aa18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 TRIM33Q9UPN9 1127 aa18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 ATG4BQ9Y4P1 393 aa18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 ITPR1Q14643 2758 aa18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 KMT2BQ9UMN6 2715 aaPredicted RBP18.72■□□□□ 0.59
PDLIM2-221ENST00000622702 IGLV3-12A0A075B6K2 115 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 G6PDP11413 515 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 RNH1P13489 461 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 IDO1P14902 403 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 IL10P22301 178 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 ASMTP46597 345 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 RAB38P57729 211 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 IRX1P78414 480 aaPredicted RBP18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 GSTA3Q16772 222 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 SYT16Q17RD7 645 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 BROXQ5VW32 411 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 IKBIPQ70UQ0 350 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 CLNKQ7Z7G1 428 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 VASH2Q86V25 355 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 FAM9CQ8IZT9 166 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 LIX1Q8N485 282 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 ESX1Q8N693 406 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 FKBP10Q96AY3 582 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 BRINP2Q9C0B6 783 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 MKKSQ9NPJ1 570 aaPredicted RBP18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 FBXW2Q9UKT8 454 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 PADI1Q9ULC6 663 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 GPR45Q9Y5Y3 372 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 SPACA6W5XKT8 324 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 PROM1O43490 865 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 ALBP02768 609 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 MRPL19P49406 292 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 TAS2R50P59544 299 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 TNFRSF17Q02223 184 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 C19orf48Q6RUI8 117 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 OVCH1Q7RTY7 1134 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 MR1Q95460 341 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 EGLN2Q96KS0 407 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 OR1F2PQ96R84 312 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 CHST8Q9H2A9 424 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 SLC26A1Q9H2B4 701 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 AKIRIN1Q9H9L7 192 aaPredicted RBP18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 TEX10Q9NXF1 929 aaPredicted RBP18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 IFT80Q9P2H3 777 aaPredicted RBP18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 TRPC4Q9UBN4 977 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 BAIAP2L1Q9UHR4 511 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 SSUH2Q9Y2M2 353 aa18.71■□□□□ 0.59
PDLIM2-221ENST00000622702 A0A1W2PR48 441 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 CYR61O00622 381 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 IL3P08700 152 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 CCNYL3P0C7X3 344 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 BUD31P41223 144 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 XCR1P46094 333 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 KLC1Q07866 573 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 SRSF6Q13247 344 aaKnown RBP18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 PTGR1Q14914 329 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 NDUFAF5Q5TEU4 345 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 GKAP1Q5VSY0 366 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 FAM71E1Q6IPT2 247 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 LCN10Q6JVE6 187 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 SHISA5Q8N114 240 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 EFCAB3Q8N7B9 438 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 TBC1D20Q96BZ9 403 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 PEX11GQ96HA9 241 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 CATSPER2Q96P56 530 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 TSSK3Q96PN8 268 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 CCNL2Q96S94 520 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 FAIM2Q9BWQ8 316 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 TGIF2Q9GZN2 237 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 PRDM9Q9NQV7 894 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 SDR39U1Q9NRG7 319 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 ZNF282Q9UDV7 671 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 ARL2BPQ9Y2Y0 163 aa18.7■□□□□ 0.58
PDLIM2-221ENST00000622702 BLACEA4D250 179 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 PSMD12O00232 456 aaPredicted RBP18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 ANKRD28O15084 1053 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 AIFM1O95831 613 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 DRD2P14416 443 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 CPN2P22792 545 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 TLX1P31314 330 aaPredicted RBP18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 ATP4BP51164 291 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 CLDN8P56748 225 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 C21orf58P58505 322 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 HEPACAMQ14CZ8 416 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 PDCD4Q53EL6 469 aaKnown RBP18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 MRPL14Q6P1L8 145 aaKnown RBP18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 FAM198BQ6UWH4 519 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 TMEM132CQ8N3T6 1108 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 BCAS4Q8TDM0 211 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 MARK4Q96L34 752 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 CSF3RQ99062 836 aa18.69■□□□□ 0.58
PDLIM2-221ENST00000622702 ACTL8Q9H568 366 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms