RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 PHF11Q9UIL8 331 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 TP53TG5Q9Y2B4 290 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 SCN2AQ99250 2005 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 TCRBV16S1A1N1A0A5B0 115 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 SERTM1A2A2V5 107 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 BLACEA4D250 179 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 TMPRSS11DO60235 418 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 CRCPO75575 148 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 CPN2P22792 545 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 HNRNPH2P55795 449 aaKnown RBP17.16■□□□□ 0.34
LITAF-220ENST00000620789 OR4D2P58180 307 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 TBL3Q12788 808 aaKnown RBP17.16■□□□□ 0.34
LITAF-220ENST00000620789 SLC13A2Q13183 592 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 RAPSNQ13702 412 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 MPP2Q14168 576 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 LACTB2Q53H82 288 aaPredicted RBP17.16■□□□□ 0.34
LITAF-220ENST00000620789 ZCCHC23Q6ZST2 131 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 PAGE2Q7Z2X7 111 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 CUZD1Q86UP6 607 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 GPR180Q86V85 440 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 KBTBD2Q8IY47 623 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 ACPTQ9BZG2 426 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 LHPPQ9H008 270 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 ZNF71Q9NQZ8 489 aaPredicted RBP17.16■□□□□ 0.34
LITAF-220ENST00000620789 VPS29Q9UBQ0 182 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 ADAM29Q9UKF5 820 aa17.16■□□□□ 0.34
LITAF-220ENST00000620789 CFAP46Q8IYW2 2715 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 EIF4E1BA6NMX2 242 aaKnown RBP17.15■□□□□ 0.34
LITAF-220ENST00000620789 K7EM74 188 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 KLHL41O60662 606 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 CTNSO60931 367 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 GBAP04062 536 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 PDGFAP04085 211 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 SERPINA7P05543 415 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 FAM58BPP0C7Q3 252 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 DHRS4L1P0CG22 281 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 UROSP10746 265 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 ICAM2P13598 275 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 CHN1P15882 459 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 NR1D1P20393 614 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 TPP2P29144 1249 aaPredicted RBP17.15■□□□□ 0.34
LITAF-220ENST00000620789 SERPINB5P36952 375 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 PGDP52209 483 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 TNFRSF17Q02223 184 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 ACTN3Q08043 901 aaPredicted RBP17.15■□□□□ 0.34
LITAF-220ENST00000620789 GALNT1Q10472 559 aaPredicted RBP17.15■□□□□ 0.34
LITAF-220ENST00000620789 IRAK1BP1Q5VVH5 260 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 PAPD4Q6PIY7 484 aaKnown RBP17.15■□□□□ 0.34
LITAF-220ENST00000620789 RIPOR1Q6ZS17 1223 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 COMMD6Q7Z4G1 85 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 NUDCD3Q8IVD9 361 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 OR6Y1Q8NGX8 325 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 TLCD1Q96CP7 247 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 THOC3Q96J01 351 aaKnown RBP17.15■□□□□ 0.34
LITAF-220ENST00000620789 PKNOX2Q96KN3 472 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 LPAR4Q99677 370 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 ATG4BQ9Y4P1 393 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 ASB4Q9Y574 426 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 PCDHGB7Q9Y5F8 929 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 CLDN16Q9Y5I7 305 aa17.15■□□□□ 0.34
LITAF-220ENST00000620789 ARHGAP10A1A4S6 786 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 SYNDIG1LA6NDD5 238 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 TGFBR3LH3BV60 316 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 BIRC5O15392 142 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 PROM1O43490 865 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 PRB1P04280 392 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 KLK1P06870 262 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 CHRNGP07510 517 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 PRR35P0CG20 571 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 SERPINB3P29508 390 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 TLX1P31314 330 aaPredicted RBP17.14■□□□□ 0.33
LITAF-220ENST00000620789 BUD31P41223 144 aaPredicted RBP17.14■□□□□ 0.33
LITAF-220ENST00000620789 MAGOHP61326 146 aaKnown RBP17.14■□□□□ 0.33
LITAF-220ENST00000620789 AP2B1P63010 937 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 ARL13AQ5H913 290 aaPredicted RBP17.14■□□□□ 0.33
LITAF-220ENST00000620789 CCNYL2Q5T2Q4 361 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 VWA5B1Q5TIE3 1220 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 PLAG1Q6DJT9 500 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 CLEC6AQ6EIG7 209 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 SCIMPQ6UWF3 145 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 ASB18Q6ZVZ8 466 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 HDXQ7Z353 690 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 CLNKQ7Z7G1 428 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 C1orf52Q8N6N3 182 aaKnown RBP17.14■□□□□ 0.33
LITAF-220ENST00000620789 SMAD5Q99717 465 aaKnown RBP17.14■□□□□ 0.33
LITAF-220ENST00000620789 ZNF552Q9H707 407 aaPredicted RBP17.14■□□□□ 0.33
LITAF-220ENST00000620789 RPF2Q9H7B2 306 aaKnown RBP17.14■□□□□ 0.33
LITAF-220ENST00000620789 EML4Q9HC35 981 aaKnown RBP17.14■□□□□ 0.33
LITAF-220ENST00000620789 BSNQ9UPA5 3926 aa17.14■□□□□ 0.33
LITAF-220ENST00000620789 TMEM120BA0PK00 339 aa17.13■□□□□ 0.33
LITAF-220ENST00000620789 WDR91A4D1P6 747 aa17.13■□□□□ 0.33
LITAF-220ENST00000620789 AZIN1O14977 448 aa17.13■□□□□ 0.33
LITAF-220ENST00000620789 ALPPP05187 535 aa17.13■□□□□ 0.33
LITAF-220ENST00000620789 CELA2AP08217 269 aa17.13■□□□□ 0.33
LITAF-220ENST00000620789 HMGCS1Q01581 520 aa17.13■□□□□ 0.33
LITAF-220ENST00000620789 EXT1Q16394 746 aa17.13■□□□□ 0.33
LITAF-220ENST00000620789 BTBD16Q32M84 506 aa17.13■□□□□ 0.33
LITAF-220ENST00000620789 AGBL2Q5U5Z8 902 aa17.13■□□□□ 0.33
LITAF-220ENST00000620789 KANK2Q63ZY3 851 aa17.13■□□□□ 0.33
LITAF-220ENST00000620789 C18orf63Q68DL7 685 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms