RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 TBC1D20Q96BZ9 403 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 TM4SF18Q96CE8 201 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 MARK4Q96L34 752 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 SLC26A1Q9H2B4 701 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 RABEP2Q9H5N1 569 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 GPN2Q9H9Y4 310 aaPredicted RBP12.85□□□□□ -0.35
NEK3-210ENST00000620675 KCNK13Q9HB14 408 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 AHSPQ9NZD4 102 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 HEY2Q9UBP5 337 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 DCTN4Q9UJW0 460 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 TCFL5Q9UL49 500 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 FARSAQ9Y285 508 aaKnown RBP12.85□□□□□ -0.35
NEK3-210ENST00000620675 CLDN16Q9Y5I7 305 aa12.85□□□□□ -0.35
NEK3-210ENST00000620675 GNG14A0A1W2PPG7 69 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 C9J4A7 227 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 MASP2O00187 686 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 PROM1O43490 865 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 DIAPH2O60879 1101 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 AIFM1O95831 613 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 FHP07954 510 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 ANXA4P09525 319 aaPredicted RBP12.84□□□□□ -0.35
NEK3-210ENST00000620675 FURINP09958 794 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 ALDOCP09972 364 aaKnown RBP12.84□□□□□ -0.35
NEK3-210ENST00000620675 RNH1P13489 461 aaKnown RBP12.84□□□□□ -0.35
NEK3-210ENST00000620675 SDC1P18827 310 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 MAOAP21397 527 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 MAPK12P53778 367 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 AQP5P55064 265 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 DIO3P55073 304 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 RAB38P57729 211 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 TAS2R50P59544 299 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 ID2Q02363 134 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 PRSS53Q2L4Q9 553 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 MINDY4Q4G0A6 757 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 MFSD4BQ5TF39 518 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 EPGNQ6UW88 154 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 CLNKQ7Z7G1 428 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 GPR180Q86V85 440 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 SPACA3Q8IXA5 215 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 OR4N5Q8IXE1 308 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 ZCCHC14Q8WYQ9 949 aaKnown RBP12.84□□□□□ -0.35
NEK3-210ENST00000620675 GFM2Q969S9 779 aaKnown RBP12.84□□□□□ -0.35
NEK3-210ENST00000620675 FKBP10Q96AY3 582 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 MIEF2Q96C03 454 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 NPLQ9BXD5 320 aaPredicted RBP12.84□□□□□ -0.35
NEK3-210ENST00000620675 VN1R1Q9GZP7 353 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 MKKSQ9NPJ1 570 aaPredicted RBP12.84□□□□□ -0.35
NEK3-210ENST00000620675 NMRK1Q9NWW6 199 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 MCM8Q9UJA3 840 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 MKL2Q9ULH7 1088 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 EXO1Q9UQ84 846 aaKnown RBP12.84□□□□□ -0.35
NEK3-210ENST00000620675 PRRC2CQ9Y520 2896 aaKnown RBP12.84□□□□□ -0.35
NEK3-210ENST00000620675 A0A088AWK7 358 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 IDSB3KWA1 339 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 LDB3O75112 727 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 IL3P08700 152 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 BCKDHAP12694 445 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 ALOX15P16050 662 aaPredicted RBP12.84□□□□□ -0.35
NEK3-210ENST00000620675 ZNF10P21506 573 aaPredicted RBP12.84□□□□□ -0.35
NEK3-210ENST00000620675 PTPN4P29074 926 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 LSP1P33241 339 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 TSFMP43897 325 aaKnown RBP12.84□□□□□ -0.35
NEK3-210ENST00000620675 IDH3AP50213 366 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 ARFIP1P53367 373 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 OCA2Q04671 838 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 PTGR1Q14914 329 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 ATP6AP1LQ52LC2 224 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 LANCL3Q6ZV70 420 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 PAGE2Q7Z2X7 111 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 PROSER1Q86XN7 944 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 FNDC5Q8NAU1 212 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.84□□□□□ -0.35
NEK3-210ENST00000620675 C16orf78Q8WTQ4 265 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 MAELQ96JY0 434 aaKnown RBP12.84□□□□□ -0.35
NEK3-210ENST00000620675 FCRL1Q96LA6 429 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 TSSK3Q96PN8 268 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 TGIF2Q9GZN2 237 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 LYRM4Q9HD34 91 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 GPN3Q9UHW5 284 aaPredicted RBP12.84□□□□□ -0.35
NEK3-210ENST00000620675 ADAM29Q9UKF5 820 aa12.84□□□□□ -0.35
NEK3-210ENST00000620675 BSNQ9UPA5 3926 aa12.83□□□□□ -0.35
NEK3-210ENST00000620675 LRATO95237 230 aa12.83□□□□□ -0.36
NEK3-210ENST00000620675 ALBP02768 609 aa12.83□□□□□ -0.36
NEK3-210ENST00000620675 CPN2P22792 545 aa12.83□□□□□ -0.36
NEK3-210ENST00000620675 PPP2R1BP30154 601 aa12.83□□□□□ -0.36
NEK3-210ENST00000620675 GNGT1P63211 74 aa12.83□□□□□ -0.36
NEK3-210ENST00000620675 RHAGQ02094 409 aa12.83□□□□□ -0.36
NEK3-210ENST00000620675 TNFRSF17Q02223 184 aa12.83□□□□□ -0.36
NEK3-210ENST00000620675 LSM12Q3MHD2 195 aaKnown RBP12.83□□□□□ -0.36
NEK3-210ENST00000620675 NDUFAF5Q5TEU4 345 aa12.83□□□□□ -0.36
NEK3-210ENST00000620675 IL23RQ5VWK5 629 aa12.83□□□□□ -0.36
NEK3-210ENST00000620675 OR2Y1Q8NGV0 311 aa12.83□□□□□ -0.36
NEK3-210ENST00000620675 C8orf44Q96CB5 159 aa12.83□□□□□ -0.36
NEK3-210ENST00000620675 PPP3R2Q96LZ3 170 aa12.83□□□□□ -0.36
NEK3-210ENST00000620675 ROGDIQ9GZN7 287 aa12.83□□□□□ -0.36
NEK3-210ENST00000620675 NECTIN3Q9NQS3 549 aa12.83□□□□□ -0.36
NEK3-210ENST00000620675 RIC8BQ9NVN3 520 aa12.83□□□□□ -0.36
NEK3-210ENST00000620675 SIRT5Q9NXA8 310 aa12.83□□□□□ -0.36
NEK3-210ENST00000620675 VTI1BQ9UEU0 232 aa12.83□□□□□ -0.36
NEK3-210ENST00000620675 G3BP2Q9UN86 482 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms