RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 STX19Q8N4C7 294 aa10.68□□□□□ -0.7
TP53-223ENST00000618944 OR6Q1Q8NGQ2 317 aa10.68□□□□□ -0.7
TP53-223ENST00000618944 BADQ92934 168 aa10.68□□□□□ -0.7
TP53-223ENST00000618944 MYDGFQ969H8 173 aa10.68□□□□□ -0.7
TP53-223ENST00000618944 UBE2E3Q969T4 207 aa10.68□□□□□ -0.7
TP53-223ENST00000618944 EXOSC8Q96B26 276 aaKnown RBP10.68□□□□□ -0.7
TP53-223ENST00000618944 TM4SF18Q96CE8 201 aa10.68□□□□□ -0.7
TP53-223ENST00000618944 LINC00615Q96LM1 132 aaPredicted RBP10.68□□□□□ -0.7
TP53-223ENST00000618944 WDR12Q9GZL7 423 aaKnown RBP10.68□□□□□ -0.7
TP53-223ENST00000618944 ROGDIQ9GZN7 287 aa10.68□□□□□ -0.7
TP53-223ENST00000618944 SLIRPQ9GZT3 109 aaKnown RBP10.68□□□□□ -0.7
TP53-223ENST00000618944 POLE4Q9NR33 117 aa10.68□□□□□ -0.7
TP53-223ENST00000618944 GPR34Q9UPC5 381 aa10.68□□□□□ -0.7
TP53-223ENST00000618944 ANGPT4Q9Y264 503 aa10.68□□□□□ -0.7
TP53-223ENST00000618944 SLC27A6Q9Y2P4 619 aa10.68□□□□□ -0.7
TP53-223ENST00000618944 XIRP2A4UGR9 3374 aa10.68□□□□□ -0.7
TP53-223ENST00000618944 PCM1Q15154 2024 aa10.68□□□□□ -0.7
TP53-223ENST00000618944 C5orf58C9J3I9 102 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 KPNA4O00629 521 aaPredicted RBP10.67□□□□□ -0.7
TP53-223ENST00000618944 LATO43561 262 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 VEGFDO43915 354 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 IFNA14P01570 189 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 CDK1P06493 297 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 EPHX1P07099 455 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 ARAFP10398 606 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 DBTP11182 482 aaKnown RBP10.67□□□□□ -0.7
TP53-223ENST00000618944 PTGER1P34995 402 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 PCBP3P57721 371 aaKnown RBP10.67□□□□□ -0.7
TP53-223ENST00000618944 DPTQ07507 201 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 CNTN1Q12860 1018 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 SPDYE7PQ495Y7 208 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 FAM78AQ5JUQ0 283 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 DEPDC1Q5TB30 811 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 KHDRBS2Q5VWX1 349 aaKnown RBP10.67□□□□□ -0.7
TP53-223ENST00000618944 SZRD1Q7Z422 152 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 ARMC8Q8IUR7 673 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 FAM20CQ8IXL6 584 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 AMER3Q8N944 861 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 ZNF675Q8TD23 568 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 SLC38A5Q8WUX1 472 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 SMG7Q92540 1137 aaKnown RBP10.67□□□□□ -0.7
TP53-223ENST00000618944 ZNF514Q96K75 400 aaPredicted RBP10.67□□□□□ -0.7
TP53-223ENST00000618944 BCL7BQ9BQE9 202 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 BTBD2Q9BX70 525 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 RSPO3Q9BXY4 272 aaPredicted RBP10.67□□□□□ -0.7
TP53-223ENST00000618944 DCSTAMPQ9H295 470 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 THSD1Q9NS62 852 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 HCN4Q9Y3Q4 1203 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 KIAA0100Q14667 2235 aaKnown RBP10.67□□□□□ -0.7
TP53-223ENST00000618944 TRBV4-1A0A0J9YWV2 114 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 FFAR1O14842 300 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 PPM1DO15297 605 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 RECKO95980 971 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 IGFBP1P08833 259 aaPredicted RBP10.67□□□□□ -0.7
TP53-223ENST00000618944 HNRNPA1P09651 372 aaKnown RBP eCLIP10.67□□□□□ -0.7
TP53-223ENST00000618944 GRK5P34947 590 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 LIM2P55344 173 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 REEP3Q6NUK4 255 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 LCTLQ6UWM7 567 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 ZNF765Q7L2R6 523 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 OLIG3Q7RTU3 272 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 ADCK2Q7Z695 626 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 HMGN2P46Q86SG4 172 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 PDZD3Q86UT5 571 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 RBM45Q8IUH3 476 aaKnown RBP10.67□□□□□ -0.7
TP53-223ENST00000618944 TAGAPQ8N103 731 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 MFSD4AQ8N468 514 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 MCFD2Q8NI22 146 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 VANGL1Q8TAA9 524 aaPredicted RBP10.67□□□□□ -0.7
TP53-223ENST00000618944 OTUB1Q96FW1 271 aaPredicted RBP10.67□□□□□ -0.7
TP53-223ENST00000618944 PPP1R16AQ96I34 528 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 MACROD1Q9BQ69 325 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 OR51E2Q9H255 320 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 EPS8L2Q9H6S3 715 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 AHSPQ9NZD4 102 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 ENPP4Q9Y6X5 453 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 CHD9Q3L8U1 2897 aa10.67□□□□□ -0.7
TP53-223ENST00000618944 CLDN24A6NM45 220 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 OR1F1O43749 312 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 MRPS14O60783 128 aaKnown RBP10.66□□□□□ -0.7
TP53-223ENST00000618944 B4GALT2O60909 372 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 PCDH8O95206 1070 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 PTHP01270 115 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 IFNW1P05000 195 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 RB1P06400 928 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 ADRA2AP08913 450 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 DDCP20711 480 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 CDH3P22223 829 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 IL12RB1P42701 662 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 GJA8P48165 433 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 VASPP50552 380 aaPredicted RBP10.66□□□□□ -0.7
TP53-223ENST00000618944 CD300CQ08708 224 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 GAB4Q2WGN9 574 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 UAP1L1Q3KQV9 507 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 C10orf62Q5T681 223 aaPredicted RBP10.66□□□□□ -0.7
TP53-223ENST00000618944 NIPAL1Q6NVV3 410 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 PNCKQ6P2M8 343 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 KLHL17Q6TDP4 642 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 UNC5DQ6UXZ4 953 aa10.66□□□□□ -0.7
TP53-223ENST00000618944 PTCHD4Q6ZW05 846 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms