RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 SUPT20HL2P0C7V6 817 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 THEGLP0DJG4 465 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 HOXA9P31269 272 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 GANABQ14697 944 aaKnown RBP11.77□□□□□ -0.53
MATR3-227ENST00000618441 SPHARQ15513 63 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 KYAT1Q16773 422 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 TMEM207Q6UWW9 146 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 IKBIPQ70UQ0 350 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 C12orf45Q8N5I9 185 aaPredicted RBP11.77□□□□□ -0.53
MATR3-227ENST00000618441 OR11H7Q8NGC8 314 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 WNT2BQ93097 391 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 C18orf25Q96B23 403 aaPredicted RBP11.77□□□□□ -0.53
MATR3-227ENST00000618441 ARMC5Q96C12 935 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 ELP4Q96EB1 424 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 FOLH1BQ9HBA9 442 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 MRM3Q9HC36 420 aaKnown RBP11.77□□□□□ -0.53
MATR3-227ENST00000618441 JPH1Q9HDC5 661 aaPredicted RBP11.77□□□□□ -0.53
MATR3-227ENST00000618441 RHCGQ9UBD6 479 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 FXYD6-FXYD2A0A087WZ82 144 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 VPS4BO75351 444 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 APBB3O95704 486 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 CXCL14O95715 111 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 CCL23P55773 120 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 CDC42P60953 191 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 S100A12P80511 92 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 ZNF91Q05481 1191 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 ADIGQ0VDE8 80 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 CLINT1Q14677 625 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 SSX1Q16384 188 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 RBMS3Q6XE24 437 aaKnown RBP11.77□□□□□ -0.53
MATR3-227ENST00000618441 BEND4Q6ZU67 534 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 SLC5A8Q8N695 610 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 EDEM1Q92611 657 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 RNFT2Q96EX2 444 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 ARL6Q9H0F7 186 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 FXYD6Q9H0Q3 95 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 ZDHHC4Q9NPG8 344 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 EXTL2Q9UBQ6 330 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 ZNF112Q9UJU3 913 aa11.77□□□□□ -0.53
MATR3-227ENST00000618441 HAS3O00219 553 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 ARPC5O15511 151 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 NARSO43776 548 aaKnown RBP11.76□□□□□ -0.53
MATR3-227ENST00000618441 CCNB2O95067 398 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 MOCS2O96007 188 aaPredicted RBP11.76□□□□□ -0.53
MATR3-227ENST00000618441 ICAM1P05362 532 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 ACPPP15309 386 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 PTAFRP25105 342 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 SMCO1Q147U7 214 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 IDNKQ5T6J7 187 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 LRRN1Q6UXK5 716 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 CDH26Q8IXH8 852 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 ZSCAN1Q8NBB4 408 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 ULK4Q96C45 1275 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 AHCYL2Q96HN2 611 aaKnown RBP11.76□□□□□ -0.53
MATR3-227ENST00000618441 MNTQ99583 582 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 EGFL8Q99944 293 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 PRKD2Q9BZL6 878 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 MIXL1Q9H2W2 232 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 PDGFCQ9NRA1 345 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 DDIT4Q9NX09 232 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 TAS2R7Q9NYW3 318 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 PGAP2Q9UHJ9 254 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 TLR6Q9Y2C9 796 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 ASB4Q9Y574 426 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 VAMP1P23763 118 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 CCR1P32246 355 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 CLCN5P51795 746 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 PGDP52209 483 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 CAPSQ13938 189 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 TMEM132BQ14DG7 1078 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 FAM74A1Q5RGS3 127 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 KDM4DQ6B0I6 523 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 B3GNT9Q6UX72 402 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 ZNF367Q7RTV3 350 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 OR10G2Q8NGC3 310 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 OR9Q2Q8NGE9 314 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 OR52P1PQ8NH57 321 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 SORCS2Q96PQ0 1159 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 DPH7Q9BTV6 452 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 SHARPINQ9H0F6 387 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 MARCH4Q9P2E8 410 aaPredicted RBP11.76□□□□□ -0.53
MATR3-227ENST00000618441 KLK4Q9Y5K2 254 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 MROH6A6NGR9 719 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 MOXD2PA6NHM9 499 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 PRRG1O14668 218 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 SLC43A1O75387 559 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 PDHA2P29803 388 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 S100A3P33764 101 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 PRMT2P55345 433 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 CLDN20P56880 219 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 FKBP1AP62942 108 aaKnown RBP11.76□□□□□ -0.53
MATR3-227ENST00000618441 CLDN10P78369 228 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 MAP2K5Q13163 448 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 XKR3Q5GH77 459 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 C10orf111Q8N326 155 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 SYNPOQ8N3V7 929 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 PLPP7Q8NBV4 271 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 ZNF248Q8NDW4 579 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 OR56A4Q8NGH8 313 aa11.76□□□□□ -0.53
MATR3-227ENST00000618441 WDR20Q8TBZ3 569 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms