RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 ATCAYQ86WG3 371 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 CAVIN3Q969G5 261 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 L3HYPDHQ96EM0 354 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 CNDP1Q96KN2 507 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 ZNF354BQ96LW1 612 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 SERPINI1Q99574 410 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 SORBS1Q9BX66 1292 aaKnown RBP23.3■■□□□ 1.32
PMS1-220ENST00000618056 MS4A12Q9NXJ0 267 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 STMN3Q9NZ72 180 aa23.3■■□□□ 1.32
PMS1-220ENST00000618056 PPIEQ9UNP9 301 aaKnown RBP23.3■■□□□ 1.32
PMS1-220ENST00000618056 HIVEP3Q5T1R4 2406 aa23.29■■□□□ 1.32
PMS1-220ENST00000618056 A8MUI8 341 aa23.29■■□□□ 1.32
PMS1-220ENST00000618056 SUPT7LO94864 414 aa23.29■■□□□ 1.32
PMS1-220ENST00000618056 WDPCPO95876 746 aa23.29■■□□□ 1.32
PMS1-220ENST00000618056 BSGP35613 385 aa23.29■■□□□ 1.32
PMS1-220ENST00000618056 ZNF33BQ06732 778 aa23.29■■□□□ 1.32
PMS1-220ENST00000618056 IFT88Q13099 833 aa23.29■■□□□ 1.32
PMS1-220ENST00000618056 SLAMF1Q13291 335 aa23.29■■□□□ 1.32
PMS1-220ENST00000618056 ACER2Q5QJU3 275 aa23.29■■□□□ 1.32
PMS1-220ENST00000618056 TTC19Q6DKK2 380 aaPredicted RBP23.29■■□□□ 1.32
PMS1-220ENST00000618056 LETMD1Q6P1Q0 360 aa23.29■■□□□ 1.32
PMS1-220ENST00000618056 ZGRF1Q86YA3 2104 aa23.29■■□□□ 1.32
PMS1-220ENST00000618056 LGI4Q8N135 537 aa23.29■■□□□ 1.32
PMS1-220ENST00000618056 RIBC1Q8N443 379 aaPredicted RBP23.29■■□□□ 1.32
PMS1-220ENST00000618056 GALNT11Q8NCW6 608 aa23.29■■□□□ 1.32
PMS1-220ENST00000618056 SNRNP40Q96DI7 357 aaKnown RBP23.29■■□□□ 1.32
PMS1-220ENST00000618056 DDX31Q9H8H2 851 aaKnown RBP23.29■■□□□ 1.32
PMS1-220ENST00000618056 PLA2G3Q9NZ20 509 aa23.29■■□□□ 1.32
PMS1-220ENST00000618056 TRPS1Q9UHF7 1281 aa23.29■■□□□ 1.32
PMS1-220ENST00000618056 ZNF225Q9UK10 706 aa23.29■■□□□ 1.32
PMS1-220ENST00000618056 CRHR1P34998 444 aa23.28■■□□□ 1.32
PMS1-220ENST00000618056 TAS2R50P59544 299 aa23.28■■□□□ 1.32
PMS1-220ENST00000618056 MEP1AQ16819 746 aa23.28■■□□□ 1.32
PMS1-220ENST00000618056 SLC5A8Q8N695 610 aa23.28■■□□□ 1.32
PMS1-220ENST00000618056 CATSPER1Q8NEC5 780 aa23.28■■□□□ 1.32
PMS1-220ENST00000618056 C7orf57Q8NEG2 295 aa23.28■■□□□ 1.32
PMS1-220ENST00000618056 TRPC4APQ8TEL6 797 aa23.28■■□□□ 1.32
PMS1-220ENST00000618056 CCDC126Q96EE4 140 aa23.28■■□□□ 1.32
PMS1-220ENST00000618056 ZNF382Q96SR6 550 aa23.28■■□□□ 1.32
PMS1-220ENST00000618056 NPAS2Q99743 824 aa23.28■■□□□ 1.32
PMS1-220ENST00000618056 ADAP2Q9NPF8 381 aa23.28■■□□□ 1.32
PMS1-220ENST00000618056 PHF11Q9UIL8 331 aa23.28■■□□□ 1.32
PMS1-220ENST00000618056 GRID1Q9ULK0 1009 aa23.28■■□□□ 1.32
PMS1-220ENST00000618056 COL12A1Q99715 3063 aa23.28■■□□□ 1.32
PMS1-220ENST00000618056 POLEQ07864 2286 aa23.27■■□□□ 1.32
PMS1-220ENST00000618056 A0A0A6YYD5 115 aa23.27■■□□□ 1.32
PMS1-220ENST00000618056 A8MUA0 341 aa23.27■■□□□ 1.32
PMS1-220ENST00000618056 PROCP04070 461 aa23.27■■□□□ 1.32
PMS1-220ENST00000618056 TSPAN8P19075 237 aa23.27■■□□□ 1.32
PMS1-220ENST00000618056 CPN2P22792 545 aa23.27■■□□□ 1.32
PMS1-220ENST00000618056 CCDC153Q494R4 210 aa23.27■■□□□ 1.32
PMS1-220ENST00000618056 MRM1Q6IN84 353 aaKnown RBP23.27■■□□□ 1.32
PMS1-220ENST00000618056 RPUSD3Q6P087 351 aaKnown RBP23.27■■□□□ 1.32
PMS1-220ENST00000618056 MTERF4Q7Z6M4 381 aaKnown RBP23.27■■□□□ 1.32
PMS1-220ENST00000618056 CLNKQ7Z7G1 428 aa23.27■■□□□ 1.32
PMS1-220ENST00000618056 GPR180Q86V85 440 aa23.27■■□□□ 1.32
PMS1-220ENST00000618056 CRLF3Q8IUI8 442 aa23.27■■□□□ 1.32
PMS1-220ENST00000618056 APCDD1LQ8NCL9 501 aa23.27■■□□□ 1.32
PMS1-220ENST00000618056 B3GNT7Q8NFL0 401 aa23.27■■□□□ 1.32
PMS1-220ENST00000618056 MTFMTQ96DP5 389 aaKnown RBP23.27■■□□□ 1.32
PMS1-220ENST00000618056 BARD1Q99728 777 aaKnown RBP23.27■■□□□ 1.32
PMS1-220ENST00000618056 ELOVL6Q9H5J4 265 aa23.27■■□□□ 1.32
PMS1-220ENST00000618056 PNO1Q9NRX1 252 aaKnown RBP23.27■■□□□ 1.32
PMS1-220ENST00000618056 FBXW2Q9UKT8 454 aa23.27■■□□□ 1.32
PMS1-220ENST00000618056 SNX6Q9UNH7 406 aa23.27■■□□□ 1.32
PMS1-220ENST00000618056 STK38LQ9Y2H1 464 aa23.27■■□□□ 1.32
PMS1-220ENST00000618056 USP9XQ93008 2570 aaPredicted RBP23.27■■□□□ 1.32
PMS1-220ENST00000618056 TRAV17A0A0B4J275 112 aa23.26■■□□□ 1.31
PMS1-220ENST00000618056 OR5H15A6NDH6 313 aa23.26■■□□□ 1.31
PMS1-220ENST00000618056 G3V2L1 256 aa23.26■■□□□ 1.31
PMS1-220ENST00000618056 EEDO75530 441 aaKnown RBP23.26■■□□□ 1.31
PMS1-220ENST00000618056 MYO1DO94832 1006 aa23.26■■□□□ 1.31
PMS1-220ENST00000618056 KRT4P19013 534 aa23.26■■□□□ 1.31
PMS1-220ENST00000618056 SLC18A2Q05940 514 aa23.26■■□□□ 1.31
PMS1-220ENST00000618056 SERTAD2Q14140 314 aa23.26■■□□□ 1.31
PMS1-220ENST00000618056 ELAVL1Q15717 326 aaKnown RBP23.26■■□□□ 1.31
PMS1-220ENST00000618056 FCRLBQ6BAA4 426 aa23.26■■□□□ 1.31
PMS1-220ENST00000618056 ZYG11AQ6WRX3 759 aa23.26■■□□□ 1.31
PMS1-220ENST00000618056 NUDT13Q86X67 352 aa23.26■■□□□ 1.31
PMS1-220ENST00000618056 CISD2Q8N5K1 135 aaKnown RBP23.26■■□□□ 1.31
PMS1-220ENST00000618056 OR2W6PQ8NHA6 318 aa23.26■■□□□ 1.31
PMS1-220ENST00000618056 BRF2Q9HAW0 419 aa23.26■■□□□ 1.31
PMS1-220ENST00000618056 LYARQ9NX58 379 aaKnown RBP23.26■■□□□ 1.31
PMS1-220ENST00000618056 VTI1BQ9UEU0 232 aa23.26■■□□□ 1.31
PMS1-220ENST00000618056 CDK2AP1O14519 115 aa23.25■■□□□ 1.31
PMS1-220ENST00000618056 PLIN3O60664 434 aa23.25■■□□□ 1.31
PMS1-220ENST00000618056 VPS4BO75351 444 aa23.25■■□□□ 1.31
PMS1-220ENST00000618056 OR4F21O95013 312 aa23.25■■□□□ 1.31
PMS1-220ENST00000618056 MLYCDO95822 493 aa23.25■■□□□ 1.31
PMS1-220ENST00000618056 MYL2P10916 166 aa23.25■■□□□ 1.31
PMS1-220ENST00000618056 PPP2R1BP30154 601 aa23.25■■□□□ 1.31
PMS1-220ENST00000618056 HNRNPH2P55795 449 aaKnown RBP23.25■■□□□ 1.31
PMS1-220ENST00000618056 TNFRSF17Q02223 184 aa23.25■■□□□ 1.31
PMS1-220ENST00000618056 STX4Q12846 297 aa23.25■■□□□ 1.31
PMS1-220ENST00000618056 BEST3Q8N1M1 668 aa23.25■■□□□ 1.31
PMS1-220ENST00000618056 ARMC10Q8N2F6 343 aa23.25■■□□□ 1.31
PMS1-220ENST00000618056 KIF2BQ8N4N8 673 aa23.25■■□□□ 1.31
PMS1-220ENST00000618056 MREGQ8N565 214 aa23.25■■□□□ 1.31
PMS1-220ENST00000618056 OR1N1Q8NGS0 311 aa23.25■■□□□ 1.31
PMS1-220ENST00000618056 C19orf60Q96EN9 201 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms