RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 FARSBQ9NSD9 589 aaKnown RBP14.03□□□□□ -0.16
UBXN1-218ENST00000616865 FAM53CQ9NYF3 392 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 VTI1BQ9UEU0 232 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 MARCOQ9UEW3 520 aaPredicted RBP14.03□□□□□ -0.16
UBXN1-218ENST00000616865 SLC12A4Q9UP95 1085 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 CSAG2Q9Y5P2 127 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 CSMD1Q96PZ7 3565 aa14.02□□□□□ -0.16
UBXN1-218ENST00000616865 A0A088AWK7 358 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 HYKKA2RU49 373 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 P2RX6O15547 441 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 RGS14O43566 566 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 LINC00032P0C843 101 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 HSD3B1P14060 373 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 ZNF10P21506 573 aaPredicted RBP14.02□□□□□ -0.17
UBXN1-218ENST00000616865 ALAS2P22557 587 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 ITGA3P26006 1051 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 HSD3B2P26439 372 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 HTR6P50406 440 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 SKP1P63208 163 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 AIMP2Q13155 320 aaKnown RBP14.02□□□□□ -0.17
UBXN1-218ENST00000616865 ABRAXAS2Q15018 415 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 MUM1Q2TAK8 710 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 PRTGQ2VWP7 1150 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 TMEM35AQ53FP2 167 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 YOD1Q5VVQ6 348 aaPredicted RBP14.02□□□□□ -0.17
UBXN1-218ENST00000616865 C1QL3Q5VWW1 255 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 TRIM40Q6P9F5 258 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 VN1R5Q7Z5H4 357 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 WDR75Q8IWA0 830 aaKnown RBP14.02□□□□□ -0.17
UBXN1-218ENST00000616865 RNF175Q8N4F7 328 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 KCT2Q8NC54 265 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 SRFBP1Q8NEF9 429 aaKnown RBP14.02□□□□□ -0.17
UBXN1-218ENST00000616865 CREB3L4Q8TEY5 395 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 NACC2Q96BF6 587 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 TM4SF19Q96DZ7 209 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 F2RL3Q96RI0 385 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 HBEGFQ99075 208 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 CCT7Q99832 543 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 MS4A8Q9BY19 250 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 REXO4Q9GZR2 422 aaKnown RBP14.02□□□□□ -0.17
UBXN1-218ENST00000616865 OR51B5Q9H339 312 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 CCDC134Q9H6E4 229 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 COPS7BQ9H9Q2 264 aaPredicted RBP14.02□□□□□ -0.17
UBXN1-218ENST00000616865 ANKHQ9HCJ1 492 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 RIC8BQ9NVN3 520 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 AHSPQ9NZD4 102 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 RUVBL1Q9Y265 456 aaKnown RBP14.02□□□□□ -0.17
UBXN1-218ENST00000616865 CREBBPQ92793 2442 aa14.02□□□□□ -0.17
UBXN1-218ENST00000616865 CENPEQ02224 2701 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 TRPC5OSA6NMA1 111 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 PIP5K1BO14986 540 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 ERI3O43414 337 aaKnown RBP14.01□□□□□ -0.17
UBXN1-218ENST00000616865 ZNF888P0CJ79 500 aaPredicted RBP14.01□□□□□ -0.17
UBXN1-218ENST00000616865 GCGRP47871 477 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 GNGT1P63211 74 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 BTKQ06187 659 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 GARNL3Q5VVW2 1013 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 KHDRBS2Q5VWX1 349 aaKnown RBP14.01□□□□□ -0.17
UBXN1-218ENST00000616865 PIWIL2Q8TC59 973 aaKnown RBP14.01□□□□□ -0.17
UBXN1-218ENST00000616865 GAL3ST3Q96A11 431 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 FKBP10Q96AY3 582 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 RGMAQ96B86 450 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 PPP1R36Q96LQ0 422 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 ZNF285Q96NJ3 590 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 SLC6A16Q9GZN6 736 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 SYNPO2LQ9H987 977 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 SLC22A11Q9NSA0 550 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 CUTCQ9NTM9 273 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 PSD3Q9NYI0 1048 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 VPS29Q9UBQ0 182 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 HAO1Q9UJM8 370 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 DNAJC15Q9Y5T4 150 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 MDC1Q14676 2089 aaKnown RBP14.01□□□□□ -0.17
UBXN1-218ENST00000616865 LRBAP50851 2863 aa14.01□□□□□ -0.17
UBXN1-218ENST00000616865 FITM1A5D6W6 292 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 LRIT2A6NDA9 550 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 SAP18O00422 153 aaKnown RBP14□□□□□ -0.17
UBXN1-218ENST00000616865 HDAC3O15379 428 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 EDF1O60869 148 aaKnown RBP14□□□□□ -0.17
UBXN1-218ENST00000616865 TROVE2P10155 538 aaKnown RBP eCLIP14□□□□□ -0.17
UBXN1-218ENST00000616865 ITGAXP20702 1163 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 MMP11P24347 488 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 HNRNPH1P31943 449 aaKnown RBP14□□□□□ -0.17
UBXN1-218ENST00000616865 SSR2P43308 183 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 TSFMP43897 325 aaKnown RBP14□□□□□ -0.17
UBXN1-218ENST00000616865 AVPR1BP47901 424 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 PLA2G16P53816 162 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 EMP3P54852 163 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 RAB8AP61006 207 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 CUL3Q13618 768 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 HERC3Q15034 1050 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 AP5B1Q2VPB7 878 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 TUBB8Q3ZCM7 444 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 DEPDC1Q5TB30 811 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 FAM219BQ5XKK7 198 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 IGFL2Q6UWQ7 119 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 TTLL10Q6ZVT0 673 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 MTERF4Q7Z6M4 381 aaKnown RBP14□□□□□ -0.17
UBXN1-218ENST00000616865 OR2L5Q8NG80 312 aa14□□□□□ -0.17
UBXN1-218ENST00000616865 MS4A6EQ96DS6 147 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms