RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 SLBPQ14493 270 aaKnown RBP eCLIP17.69■□□□□ 0.42
CDX1-202ENST00000616154 RBBP5Q15291 538 aaKnown RBP17.69■□□□□ 0.42
CDX1-202ENST00000616154 TERF2Q15554 542 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 TBCCQ15814 346 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 PDK4Q16654 411 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 LRIG3Q6UXM1 1119 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 LRRC70Q7Z2Q7 622 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 DOLPP1Q86YN1 238 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.69■□□□□ 0.42
CDX1-202ENST00000616154 ZNF295-AS1Q8N0V1 137 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 KRT78Q8N1N4 520 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 AGAP11Q8TF27 550 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 DEFB126Q9BYW3 111 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 ALG9Q9H6U8 611 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 VIPAS39Q9H9C1 493 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 ZNF180Q9UJW8 692 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 RNF112Q9ULX5 631 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 ACOT9Q9Y305 439 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 MMACHCQ9Y4U1 282 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 ASB1Q9Y576 335 aa17.69■□□□□ 0.42
CDX1-202ENST00000616154 EXOC1LA0A1B0GW35 172 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 E9PLN8 166 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 PRRG2O14669 202 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 ZNHIT1O43257 154 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 H2AFYO75367 372 aaKnown RBP17.68■□□□□ 0.42
CDX1-202ENST00000616154 CLEC3AO75596 197 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 ALDOAP04075 364 aaKnown RBP17.68■□□□□ 0.42
CDX1-202ENST00000616154 C2P06681 752 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 TOR1AIP1Q5JTV8 583 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 NCCRP1Q6ZVX7 275 aaPredicted RBP17.68■□□□□ 0.42
CDX1-202ENST00000616154 RAPH1Q70E73 1250 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 HDXQ7Z353 690 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 FGD2Q7Z6J4 655 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 EID3Q8N140 333 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 APCDD1LQ8NCL9 501 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 B3GNT7Q8NFL0 401 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 DCAKDQ8WVC6 231 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 GAL3ST3Q96A11 431 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 PTCD3Q96EY7 689 aaKnown RBP17.68■□□□□ 0.42
CDX1-202ENST00000616154 DMRTA2Q96SC8 542 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 PAFAH2Q99487 392 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 VKORC1Q9BQB6 163 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 CCDC77Q9BR77 488 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 EFCAB11Q9BUY7 163 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 CD244Q9BZW8 370 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 ROPN1BQ9BZX4 212 aaPredicted RBP17.68■□□□□ 0.42
CDX1-202ENST00000616154 RHBGQ9H310 441 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 ROPN1Q9HAT0 212 aaPredicted RBP17.68■□□□□ 0.42
CDX1-202ENST00000616154 SNX15Q9NRS6 342 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 ZNF446Q9NWS9 450 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 CD274Q9NZQ7 290 aa17.68■□□□□ 0.42
CDX1-202ENST00000616154 KLF13Q9Y2Y9 288 aaPredicted RBP17.68■□□□□ 0.42
CDX1-202ENST00000616154 ANKRD17O75179 2603 aaKnown RBP17.68■□□□□ 0.42
CDX1-202ENST00000616154 CELSR1Q9NYQ6 3014 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 LRIT2A6NDA9 550 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 A8MUA0 341 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 ADAM10O14672 748 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 KLK8O60259 260 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 CD22P20273 847 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 SSTR2P30874 369 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 PTGER1P34995 402 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 MEOX1P50221 254 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 CLCN2P51788 898 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 STXBP1P61764 594 aaKnown RBP17.67■□□□□ 0.42
CDX1-202ENST00000616154 BMPR2Q13873 1038 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 MROH9Q5TGP6 573 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 ADGRD1Q6QNK2 874 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 VN1R5Q7Z5H4 357 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 CNPY4Q8N129 248 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 OR2W6PQ8NHA6 318 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 ESAMQ96AP7 390 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 NXNL1Q96CM4 212 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 GPR78Q96P69 363 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 ZIM3Q96PE6 472 aa17.67■□□□□ 0.42
CDX1-202ENST00000616154 PPIEQ9UNP9 301 aaKnown RBP17.67■□□□□ 0.42
CDX1-202ENST00000616154 TRBV11-1A0A0K0K1C0 115 aa17.66■□□□□ 0.42
CDX1-202ENST00000616154 KLRC4-KLRK1H3BQV0 150 aa17.66■□□□□ 0.42
CDX1-202ENST00000616154 CLGNO14967 610 aa17.66■□□□□ 0.42
CDX1-202ENST00000616154 S100BP04271 92 aaPredicted RBP17.66■□□□□ 0.42
CDX1-202ENST00000616154 HPDP32754 393 aaPredicted RBP17.66■□□□□ 0.42
CDX1-202ENST00000616154 KIR3DL1P43629 444 aa17.66■□□□□ 0.42
CDX1-202ENST00000616154 SERPINB8P50452 374 aa17.66■□□□□ 0.42
CDX1-202ENST00000616154 ZNF844Q08AG5 666 aa17.66■□□□□ 0.42
CDX1-202ENST00000616154 DOC2AQ14183 400 aa17.66■□□□□ 0.42
CDX1-202ENST00000616154 ACAP2Q15057 778 aa17.66■□□□□ 0.42
CDX1-202ENST00000616154 FAM83EQ2M2I3 478 aa17.66■□□□□ 0.42
CDX1-202ENST00000616154 FBXO48Q5FWF7 155 aa17.66■□□□□ 0.42
CDX1-202ENST00000616154 SULF2Q8IWU5 870 aa17.66■□□□□ 0.42
CDX1-202ENST00000616154 SCUBE1Q8IWY4 988 aa17.66■□□□□ 0.42
CDX1-202ENST00000616154 KCTD4Q8WVF5 259 aa17.66■□□□□ 0.42
CDX1-202ENST00000616154 MS4A6EQ96DS6 147 aa17.66■□□□□ 0.42
CDX1-202ENST00000616154 SPOCK3Q9BQ16 436 aa17.66■□□□□ 0.42
CDX1-202ENST00000616154 NPLQ9BXD5 320 aaPredicted RBP17.66■□□□□ 0.42
CDX1-202ENST00000616154 ZNF490Q9ULM2 529 aaPredicted RBP17.66■□□□□ 0.42
CDX1-202ENST00000616154 A0A096LPK6 155 aa17.65■□□□□ 0.42
CDX1-202ENST00000616154 SYCE1LA8MT33 242 aa17.65■□□□□ 0.42
CDX1-202ENST00000616154 TFECO14948 347 aaPredicted RBP17.65■□□□□ 0.42
CDX1-202ENST00000616154 MYO1DO94832 1006 aa17.65■□□□□ 0.42
CDX1-202ENST00000616154 KLHL2O95198 593 aa17.65■□□□□ 0.42
CDX1-202ENST00000616154 HNRNPH1P31943 449 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms