RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 GNG11P61952 73 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 PDK4Q16654 411 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 EMC4Q5J8M3 183 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 TMEM211Q6ICI0 200 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 SULT1C3Q6IMI6 304 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 ZNF793Q6ZN11 406 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 PDPRQ8NCN5 879 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 MORN4Q8NDC4 146 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 OR2M7Q8NG81 312 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 DAZLQ92904 295 aaKnown RBP19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 TSPAN17Q96FV3 270 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 EFCAB11Q9BUY7 163 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 VTI1BQ9UEU0 232 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 RNF6Q9Y252 685 aa19.28■□□□□ 0.68
TRAPPC3-208ENST00000616074 G3V3Y1 287 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 LDB3O75112 727 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 ATP6V0D1P61421 351 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 PPIAP62937 165 aaKnown RBP19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 MRPS25P82663 173 aaKnown RBP19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 PLGLB1Q02325 96 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 TGM3Q08188 693 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 STX4Q12846 297 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 ILF2Q12905 390 aaKnown RBP19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 RCN2Q14257 317 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 EFTUD2Q15029 972 aaKnown RBP eCLIP19.27■□□□□ 0.689e-8■■■■■ 28.3
TRAPPC3-208ENST00000616074 CDKL4Q5MAI5 379 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 UBE3DQ7Z6J8 389 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 OR14A16Q8NHC5 309 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 PYROXD1Q8WU10 500 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 ASB5Q8WWX0 329 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 KRT12Q99456 494 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 GPR22Q99680 433 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 RBBP8Q99708 897 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 NAPGQ99747 312 aaPredicted RBP19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 MAPKAP1Q9BPZ7 522 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 TTTY12Q9BZ98 90 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 OR8D2Q9GZM6 311 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 MCCC2Q9HCC0 563 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 CD274Q9NZQ7 290 aa19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 PTBP2Q9UKA9 531 aaKnown RBP19.27■□□□□ 0.68
TRAPPC3-208ENST00000616074 NKX2-6A6NCS4 301 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 FAM90A27PA6NNH2 459 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 C17orf105B2RV13 164 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 ACOT7O00154 380 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 CCNT2O60583 730 aaKnown RBP19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 STMN1P16949 149 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 CAPN3P20807 821 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 CHRNB4P30926 498 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 GMPRP36959 345 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 KCNC1P48547 511 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 CHIT1Q13231 466 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 ZNF750Q32MQ0 723 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 SLC2A12Q8TD20 617 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 CDKL2Q92772 493 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 EXT2Q93063 718 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 SCYL1Q96KG9 808 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 KCNC2Q96PR1 638 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 MS4A8Q9BY19 250 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 UCK2Q9BZX2 261 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 ZDHHC11Q9H8X9 412 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 LYRM4Q9HD34 91 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 SAYSD1Q9NPB0 183 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 NPDC1Q9NQX5 325 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 TXNDC16Q9P2K2 825 aa19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 INTS1Q8N201 2190 aaKnown RBP19.26■□□□□ 0.67
TRAPPC3-208ENST00000616074 NPIPA2E9PIF3 369 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 NPIPA3F8WFD2 350 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 RTCAO00442 366 aaKnown RBP19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 ZNF354AO60765 605 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 GLSO94925 669 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 IGFBP2P18065 325 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 TNNI3P19429 210 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 PAFAH1B1P43034 410 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 MSH2P43246 934 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 RNF4P78317 190 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 ID2Q02363 134 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 IRF8Q02556 426 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 TFF3Q07654 80 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 LAPTM5Q13571 262 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 ZKSCAN8Q15776 578 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 HIST2H2ACQ16777 129 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 PAGE2BQ5JRK9 111 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 HIST2H2AA3Q6FI13 130 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 PAOXQ6QHF9 649 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 CDH24Q86UP0 819 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 LILRB4Q8NHJ6 448 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 ZNF473Q8WTR7 871 aaKnown RBP19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 RND1Q92730 232 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 KIAA1191Q96A73 305 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 UBXN10Q96LJ8 280 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 CPNE1Q99829 537 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 TBCDQ9BTW9 1192 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 ROGDIQ9GZN7 287 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 RNF112Q9ULX5 631 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 LIPGQ9Y5X9 500 aa19.25■□□□□ 0.67
TRAPPC3-208ENST00000616074 TCRBV9S1A1TA0A576 114 aa19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 SH3BGRLO75368 114 aa19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 ATP5A1P25705 553 aaKnown RBP19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 GP5P40197 560 aa19.24■□□□□ 0.67
TRAPPC3-208ENST00000616074 NUP107P57740 925 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms