RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 PCDHGB6Q9Y5F9 930 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 G3V2L1 256 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 DUX1O43812 170 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 CD70P32970 193 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 NUDT1P36639 197 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 DUSP3P51452 185 aaPredicted RBP8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 LRP8Q14114 963 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 PHF19Q5T6S3 580 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 FBXO46Q6PJ61 603 aaPredicted RBP8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 SUSD1Q6UWL2 747 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 RPS27LQ71UM5 84 aaKnown RBP8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 CHST4Q8NCG5 386 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 PSD4Q8NDX1 1056 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 OR4K17Q8NGC6 315 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 LMX1AQ8TE12 382 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 CSNK1G1Q9HCP0 422 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 FANCFQ9NPI8 374 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 FAM172BPA6NC97 362 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 RNH1P13489 461 aaKnown RBP8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 ADRB3P13945 408 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 CD72P21854 359 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 HSD11B1P28845 292 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 VLDLRP98155 873 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 ADAM15Q13444 863 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 TLR1Q15399 786 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 VMACQ2NL98 169 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 FLYWCH1Q4VC44 716 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 LCN8Q6JVE9 175 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 SCAMP4Q969E2 229 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 TREX1Q9NSU2 369 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 GPR34Q9UPC5 381 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 SHROOM3Q8TF72 1996 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 GLDCP23378 1020 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 GRHL2Q6ISB3 625 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 SHQ1Q6PI26 577 aaKnown RBP8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 ALKAL1Q6UXT8 129 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 BAIAP2L2Q6UXY1 529 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 ZBTB46Q86UZ6 589 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 AMIGO1Q86WK6 493 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 ZNF440Q8IYI8 595 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 FUBP1Q96AE4 644 aaKnown RBP8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 SCGB3A2Q96PL1 93 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 PTGES2Q9H7Z7 377 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 GRHPRQ9UBQ7 328 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 DKKL1Q9UK85 242 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 PCDHGB5Q9Y5G0 923 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 TP53I11O14683 189 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 CBX3Q13185 183 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 RASGEF1AQ8N9B8 481 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 FBXL20Q96IG2 436 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 METTL2AQ96IZ6 378 aaKnown RBP8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 TOX2Q96NM4 488 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 SLC12A9Q9BXP2 914 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 SAGE1Q9NXZ1 904 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 PRKAB1Q9Y478 270 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 WDR45Q9Y484 360 aa8.77□□□□□ -1.01
SPTBN1-207ENST00000615901 DRGXA6NNA5 263 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 HEPACAM2A8MVW5 462 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 HK1P19367 917 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 ARSDP51689 593 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 PUM1Q14671 1186 aaKnown RBP eCLIP8.76□□□□□ -1.012e-6■■■■□ 20.1
SPTBN1-207ENST00000615901 PIGGQ5H8A4 983 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 CLIP4Q8N3C7 705 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 TUBGCP6Q96RT7 1819 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 KIAA1217Q5T5P2 1943 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 A0A1W2PP55 124 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 DENRO43583 198 aaKnown RBP8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 HSDL2Q6YN16 418 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 PMEPA1Q969W9 287 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 UBR3Q6ZT12 1888 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 IQCMA0A1B0GVH7 501 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 LASP1Q14847 261 aaKnown RBP8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 CST6Q15828 149 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 ANO7Q6IWH7 933 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 SLC22A15Q8IZD6 547 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 ZNF548Q8NEK5 533 aaPredicted RBP8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 CST11Q9H112 138 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 METTL7AQ9H8H3 244 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 HRASLS2Q9NWW9 162 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 CYP8B1Q9UNU6 501 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 CPED1A4D0V7 1026 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 AHSA1O95433 338 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 EDNRAP25101 427 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 CLCA4Q14CN2 919 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 SCD5Q86SK9 330 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.76□□□□□ -1.019e-7■■■□□ 17
SPTBN1-207ENST00000615901 COQ8BQ96D53 544 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 RDH14Q9HBH5 336 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 ABCA4P78363 2273 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 CACNA1IQ9P0X4 2223 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 PRAMEF33A0A0G2JMD5 474 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 PRAMEF10O60809 474 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 RABIFP47224 123 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 SLC6A9P48067 706 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 GRB7Q14451 532 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 CDHR3Q6ZTQ4 885 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 TMEM234Q8WY98 164 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 CHMP1AQ9HD42 196 aaPredicted RBP8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 GIMAP2Q9UG22 337 aa8.76□□□□□ -1.01
SPTBN1-207ENST00000615901 PPM1BO75688 479 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms