RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 NPC1L1Q9UHC9 1359 aa2.43□□□□□ -2.02
HMGB1P24-202ENST00000615653 PTCH1Q13635 1447 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 TRAV6A0A075B6T7 132 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 A0A0A6YYC8 382 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 TCP11X1B4DZS4 312 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 I3L1I5 382 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 TLR4O00206 839 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 PSMD11O00231 422 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 VCYO14598 125 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 TRDMT1O14717 391 aaKnown RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 ALOX15BO15296 676 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 OGG1O15527 345 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 ZNHIT1O43257 154 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 ZNF208O43345 1280 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 DCXO43602 365 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 BUD23O43709 281 aaKnown RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 SELENOFO60613 162 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 TSPAN1O60635 241 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 PRAMEF11O60813 436 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 ATP9AO75110 1047 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 VPS26AO75436 327 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 CTAG2O75638 210 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 ECDO95905 644 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 LDLRP01130 860 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 EGFP01133 1207 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 IL1BP01584 269 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 IGHV4-39P01824 125 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 C9P02748 559 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 CXCL10P02778 98 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 IGFBP1P08833 259 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 CFC1BP0CG36 223 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 CFC1P0CG37 223 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 FAM106CPP0CH98 169 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 SLC2A3P11169 496 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 DBTP11182 482 aaKnown RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 ODC1P11926 461 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 CPA3P15088 417 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 MYOD1P15172 320 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 UGT1A6P19224 532 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 ANXA7P20073 488 aaKnown RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 DNASE1P24855 282 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 MSNP26038 577 aaKnown RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 NMT1P30419 496 aaKnown RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 CA8P35219 290 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 ALDH3B1P43353 468 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 CDKN1BP46527 198 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 HAAOP46952 286 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 NPBWR1P48145 328 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 SMSP52788 366 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 HUNKP57058 714 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 SSTP61278 116 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 BASP1P80723 227 aaKnown RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 DR1Q01658 176 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 CSTF1Q05048 431 aaKnown RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 MAD2L1Q13257 205 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 CYLC2Q14093 348 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 STXBP2Q15833 593 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 KLHL40Q2TBA0 621 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 NKAIN1Q4KMZ8 207 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 BCL7AQ4VC05 210 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 EPC2Q52LR7 807 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 MPPE1Q53F39 396 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 SIRPB2Q5JXA9 342 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 PIP5KL1Q5T9C9 394 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 KCTD11Q693B1 232 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 TXNRD3NBQ6F5E7 133 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 PTRHD1Q6GMV3 140 aaKnown RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 SNRNP48Q6IEG0 339 aaKnown RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 DUS1LQ6P1R4 473 aaKnown RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 ZNF852Q6ZMS4 543 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 TMEM182Q6ZP80 229 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 GPR180Q86V85 440 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 PAQR7Q86WK9 346 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 TMEM173Q86WV6 379 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 CCDC60Q8IWA6 550 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 ZNF34Q8IZ26 560 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 SLC7A5P1Q8MH63 180 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 CRYBG2Q8N1P7 616 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 CIARTQ8N365 385 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 GPR137CQ8N3F9 429 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 RNF148Q8N7C7 305 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 CEP112Q8N8E3 955 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 RASGEF1AQ8N9B8 481 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 STKLD1Q8NE28 680 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 FAM71CQ8NEG0 241 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 SPATA4Q8NEY3 305 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 OR52B4Q8NGK2 314 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 OR9A1PQ8NGU1 263 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 FAM81AQ8TBF8 368 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 ST6GALNAC6Q969X2 333 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 ULK4Q96C45 1275 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 RHBDF1Q96CC6 855 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 ZNF501Q96CX3 271 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 RRNAD1Q96FB5 475 aaKnown RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 C17orf77Q96MU5 243 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 RPRD1AQ96P16 312 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 LRRC3BQ96PB8 259 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 BTBD9Q96Q07 612 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 CYTH2Q99418 400 aa2.42□□□□□ -2.02
HMGB1P24-202ENST00000615653 CHP1Q99653 195 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms