RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 C4BPBP20851 252 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 CD27P26842 260 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 BMP8BP34820 402 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 RACK1P63244 317 aaKnown RBP9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 SH3BP2P78314 561 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 DAG1Q14118 895 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 NSDHLQ15738 373 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 KHDC1Q4VXA5 237 aaKnown RBP9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 KLHL22Q53GT1 634 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 CYBRD1Q53TN4 286 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 RABL3Q5HYI8 236 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 BMP8AQ7Z5Y6 402 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 RAB43Q86YS6 212 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 SLC22A15Q8IZD6 547 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 KRTCAP2Q8N6L1 136 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 OR56A3Q8NH54 315 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 SMIM14Q96QK8 99 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 IL37Q9NZH6 218 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 DNAJC15Q9Y5T4 150 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 SCN4AP35499 1836 aa9.04□□□□□ -0.96
CLTCL1-208ENST00000615606 CITO14578 2027 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 ZNF3P17036 446 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 CSNK1EP49674 416 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 DCTN2Q13561 401 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 FGL2Q14314 439 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 KLHL26Q53HC5 615 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 DPY19L2P1Q6NXN4 242 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 OR7G3Q8NG95 312 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 C16orf78Q8WTQ4 265 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 GAL3ST3Q96A11 431 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 CMKLR1Q99788 373 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 HMG20AQ9NP66 347 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 TRNAU1APQ9NX07 287 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 CA5BQ9Y2D0 317 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 MAN2B2Q9Y2E5 1009 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 NPIPA5E9PKD4 350 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 NOBOXO60393 691 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 SNX4O95219 450 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 C1orf105O95561 183 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 ZBTB11O95625 1053 aaPredicted RBP9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 C9P02748 559 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 OR12D1P0DN82 309 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 MAGP20916 626 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 GSTT1P30711 240 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 ADARP55265 1226 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 RPE65Q16518 533 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 FRRS1Q6ZNA5 592 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 IZUMO1Q8IYV9 350 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 CANT1Q8WVQ1 401 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 ASB11Q8WXH4 323 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 C1GALT1C1Q96EU7 318 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 SPRTNQ9H040 489 aaPredicted RBP9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 IL21Q9HBE4 155 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 KLF15Q9UIH9 416 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 NPIPA1Q9UND3 350 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 WASF2Q9Y6W5 498 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 FAM92AA1XBS5 289 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 G3V2L1 256 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 ASNA1O43681 348 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 TSC22D2O75157 780 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 RPS17P08708 135 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 FPR1P21462 350 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 RCVRNP35243 200 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 SIM1P81133 766 aaPredicted RBP9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 TRAM2Q15035 370 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 WSCD2Q2TBF2 565 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 ZNF483Q8TF39 744 aaPredicted RBP9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 TSEN15Q8WW01 171 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 UHRF1Q96T88 793 aaPredicted RBP9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 MCHR1Q99705 422 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 AP1M2Q9Y6Q5 423 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 CLEC3AO75596 197 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 ECDO95905 644 aaPredicted RBP9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 CSTAP01040 98 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 OTX2P32243 289 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 TAS2R38P59533 333 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 KCTD21Q4G0X4 260 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 PRPF38BQ5VTL8 546 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 GPR153Q6NV75 609 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 TMEM107Q6UX40 140 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 C6orf120Q7Z4R8 191 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 PACRGLQ8N7B6 248 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 EPHX3Q9H6B9 360 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 PLEKHA1Q9HB21 404 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 SLC35C2Q9NQQ7 365 aa9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 RPL36Q9Y3U8 105 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-208ENST00000615606 PRRC2BQ5JSZ5 2229 aaKnown RBP9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 ADAMTSL1Q8N6G6 1762 aa9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 TLR4O00206 839 aa9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 LINC01565O15544 149 aa9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 EEDO75530 441 aaKnown RBP9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 FGF4P08620 206 aa9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 DBTP11182 482 aaKnown RBP9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 PEX2P28328 305 aa9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 NUP62P37198 522 aaPredicted RBP9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 STAT5AP42229 794 aa9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 CTSL3PQ5NE16 218 aa9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 NANOGP8Q6NSW7 305 aa9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 AHSA2Q719I0 299 aa9.02□□□□□ -0.96
CLTCL1-208ENST00000615606 MCATQ8IVS2 390 aaKnown RBP9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms