RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 TIA1P31483 386 aaKnown RBP eCLIP10.38□□□□□ -0.754e-10■■■□□ 14.8
SENP3-EIF4A1-201ENST00000614237 KDELR2P33947 212 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 HSD17B2P37059 387 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 EIF2DP41214 584 aaKnown RBP10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 TEAD4Q15561 434 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 WDR45BQ5MNZ6 344 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 MED27Q6P2C8 311 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 FAHD1Q6P587 224 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 LCTLQ6UWM7 567 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ZNF621Q6ZSS3 439 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 OTOP2Q7RTS6 562 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SYT12Q8IV01 421 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SLC30A8Q8IWU4 369 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 DNAJC5GQ8N7S2 189 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 UBE2E3Q969T4 207 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 APOLD1Q96LR9 279 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 TMEM38AQ9H6F2 299 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 MYNNQ9NPC7 610 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SNTG1Q9NSN8 517 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SPEF1Q9Y4P9 236 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 KCNE2Q9Y6J6 123 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ARID1BQ8NFD5 2236 aaPredicted RBP10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 TMEM202A6NGA9 273 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CACNB4O00305 520 aaPredicted RBP10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SEMA3DO95025 777 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PTX3P26022 381 aaPredicted RBP10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 DNAJA1P31689 397 aaKnown RBP10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 KRT20P35900 424 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ITGA1P56199 1179 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 MLIPQ5VWP3 458 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 OR4F3Q6IEY1 312 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 DOK6Q6PKX4 331 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SVOPQ8N4V2 548 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 OXR1Q8N573 874 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 VPS37AQ8NEZ2 397 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 LRRC3BQ96PB8 259 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PITX2Q99697 317 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 EBPLQ9BY08 206 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ZNF717Q9BY31 904 aaPredicted RBP10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 RHBGQ9H310 441 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 B3GNT3Q9Y2A9 372 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 C1GALT1C1LP0DN25 315 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CKMT1AP12532 417 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CEBPBP17676 345 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ENGP17813 658 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 FPR1P21462 350 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 GRK5P34947 590 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SYTL3Q4VX76 610 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 TJAP1Q5JTD0 557 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 OR2T5Q6IEZ7 315 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 VN1R2Q8NFZ6 395 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 OR9A1PQ8NGU1 263 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 OR2T29Q8NH02 315 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 DUSP26Q9BV47 211 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 RNF6Q9Y252 685 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 WNT6Q9Y6F9 365 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CNTRLQ7Z7A1 2325 aa10.38□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 GABRR3A8MPY1 467 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 KLHL18O94889 574 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PRKCAP17252 672 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CBLP22681 906 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ITPKAP23677 461 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 OR1E2P47887 323 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CSNK2BP67870 215 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ELAVL3Q14576 367 aaKnown RBP10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 TMEM220Q6QAJ8 160 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SETD9Q8NE22 299 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 DYNC2LI1Q8TCX1 351 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CYB5D2Q8WUJ1 264 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ZNF480Q8WV37 535 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 EGLN2Q96KS0 407 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 C7orf34Q96L11 122 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 FAM129BQ96TA1 746 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PHOX2BQ99453 314 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SGK2Q9HBY8 427 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 EXO1Q9UQ84 846 aaKnown RBP10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CLCA3PQ9Y6N3 262 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 MYOFQ9NZM1 2061 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 TMEM229AB2RXF0 380 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 NFATC1O95644 943 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SLC16A8O95907 504 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 MVDP53602 400 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ST8SIA6P61647 398 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ACSM2AQ08AH3 577 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 FCHO2Q0JRZ9 810 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 FADDQ13158 208 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ENPP2Q13822 863 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 ACSM2BQ68CK6 577 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 TIGD4Q8IY51 512 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 AMER2Q8N7J2 671 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 GTPBP3Q969Y2 492 aaKnown RBP10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 GABARAPL3Q9BY60 117 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SLIRPQ9GZT3 109 aaKnown RBP10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 WWP2O00308 870 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 YY2O15391 372 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 PCMT1P22061 227 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 SLC14A1Q13336 389 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 NAE1Q13564 534 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 CPTPQ5TA50 214 aa10.37□□□□□ -0.75
SENP3-EIF4A1-201ENST00000614237 C11orf96Q7Z7L8 435 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms