RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 ZC3H12BQ5HYM0 836 aaKnown RBP10.4□□□□□ -0.75
FAM3A-221ENST00000612856 PDZK1Q5T2W1 519 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 ARHGAP40Q5TG30 622 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 SIGIRRQ6IA17 410 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 CHMP1BQ7LBR1 199 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 SLC6A18Q96N87 628 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 TRNT1Q96Q11 434 aaKnown RBP10.4□□□□□ -0.75
FAM3A-221ENST00000612856 TUBA1CQ9BQE3 449 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 H2AFY2Q9P0M6 372 aaPredicted RBP10.4□□□□□ -0.75
FAM3A-221ENST00000612856 ACTR3BQ9P1U1 418 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 LHX3Q9UBR4 397 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 ADGRE2Q9UHX3 823 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 ISPDA4D126 451 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 SLC16A5O15375 505 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 NUPL2O15504 423 aaKnown RBP10.39□□□□□ -0.75
FAM3A-221ENST00000612856 RGS10O43665 173 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 PCDH7O60245 1069 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 DIRAS1O95057 198 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 C1QAP02745 245 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 C8GP07360 202 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 SLC35E2BP0CK96 405 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 ARNTP27540 789 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 TUBA3CQ13748 450 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 INTS11Q5TA45 600 aaKnown RBP10.39□□□□□ -0.75
FAM3A-221ENST00000612856 STEAP4Q687X5 459 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 KDELC1Q6UW63 502 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 KDM1BQ8NB78 822 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 OR10A6Q8NH74 314 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 FSCN3Q9NQT6 498 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 TAS2R9Q9NYW1 312 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 NUDT4Q9NZJ9 180 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 SRPRAP08240 638 aaKnown RBP10.39□□□□□ -0.75
FAM3A-221ENST00000612856 CCNYL3P0C7X3 344 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 POU2F1P14859 743 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 MED22Q15528 200 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 LYSMD4Q5XG99 296 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 ANKRD34AQ69YU3 496 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 C2CD4AQ8NCU7 369 aaPredicted RBP10.39□□□□□ -0.75
FAM3A-221ENST00000612856 C7orf57Q8NEG2 295 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 FRS2Q8WU20 508 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 APOOQ9BUR5 198 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 ZBTB20Q9HC78 741 aaPredicted RBP10.39□□□□□ -0.75
FAM3A-221ENST00000612856 ANKHQ9HCJ1 492 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 EVA1BQ9NVM1 165 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 R4GN57 208 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 KHNYNO15037 678 aaKnown RBP10.39□□□□□ -0.75
FAM3A-221ENST00000612856 HOXC11O43248 304 aaPredicted RBP10.39□□□□□ -0.75
FAM3A-221ENST00000612856 PSKH1P11801 424 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 TPMTP51580 245 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 NUDT6P53370 316 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 ABATP80404 500 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 ZNF155Q12901 538 aaPredicted RBP10.39□□□□□ -0.75
FAM3A-221ENST00000612856 SEMA3AQ14563 771 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 ELOCQ15369 112 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 OR4D1Q15615 310 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 ADPRMQ3LIE5 342 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 ATAD3CQ5T2N8 411 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 FRG2Q64ET8 278 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 OR4F3Q6IEY1 312 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 GRAMD2AQ8IUY3 354 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 OR9A1PQ8NGU1 263 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 CCL4L1Q8NHW4 92 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 KCNJ9Q92806 393 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 MR1Q95460 341 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 MAP6Q96JE9 813 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 FRG2BQ96QU4 278 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 HCN3Q9P1Z3 774 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 PCDHGA10Q9Y5H3 936 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 CLCA3PQ9Y6N3 262 aa10.39□□□□□ -0.75
FAM3A-221ENST00000612856 ZNF638Q14966 1978 aaKnown RBP10.38□□□□□ -0.75
FAM3A-221ENST00000612856 OTOL1A6NHN0 477 aaPredicted RBP10.38□□□□□ -0.75
FAM3A-221ENST00000612856 CLDN4O14493 209 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 REM1O75628 298 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 APBB3O95704 486 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 LCKP06239 509 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 YES1P07947 543 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 SPNP16150 400 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 LHCGRP22888 699 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 CCR8P51685 355 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 TAS2R50P59544 299 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 TBPL1P62380 186 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 EIF2B5Q13144 721 aaKnown RBP10.38□□□□□ -0.75
FAM3A-221ENST00000612856 STK11Q15831 433 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 ZNF77Q15935 545 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 WSCD2Q2TBF2 565 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 GOLGA7Q7Z5G4 137 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 BPHLQ86WA6 291 aaPredicted RBP10.38□□□□□ -0.75
FAM3A-221ENST00000612856 CPSF7Q8N684 471 aaKnown RBP10.38□□□□□ -0.75
FAM3A-221ENST00000612856 GATSQ8NAP1 163 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 GPR151Q8TDV0 419 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 MMP28Q9H239 520 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 SLC32A1Q9H598 525 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 CPNE5Q9HCH3 593 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 MBNL1Q9NR56 388 aaKnown RBP10.38□□□□□ -0.75
FAM3A-221ENST00000612856 AGPAT4Q9NRZ5 378 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 INTS7Q9NVH2 962 aaKnown RBP10.38□□□□□ -0.75
FAM3A-221ENST00000612856 DHRS7Q9Y394 339 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 LRRC37A2A6NM11 1700 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 LOC100130705A0A1B0GUX0 176 aa10.38□□□□□ -0.75
FAM3A-221ENST00000612856 H3BUI4 141 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms