RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 EFHD1Q9BUP0 239 aa8.46□□□□□ -1.06
CCDC47-207ENST00000612558 ROGDIQ9GZN7 287 aa8.46□□□□□ -1.06
CCDC47-207ENST00000612558 KLHL25Q9H0H3 589 aa8.46□□□□□ -1.06
CCDC47-207ENST00000612558 ABCG4Q9H172 646 aa8.46□□□□□ -1.06
CCDC47-207ENST00000612558 GORASP2Q9H8Y8 452 aa8.46□□□□□ -1.06
CCDC47-207ENST00000612558 UCKL1Q9NWZ5 548 aa8.46□□□□□ -1.06
CCDC47-207ENST00000612558 TAS2R9Q9NYW1 312 aa8.46□□□□□ -1.06
CCDC47-207ENST00000612558 TAS2R7Q9NYW3 318 aa8.46□□□□□ -1.06
CCDC47-207ENST00000612558 EHD3Q9NZN3 535 aa8.46□□□□□ -1.06
CCDC47-207ENST00000612558 USP22Q9UPT9 525 aa8.46□□□□□ -1.06
CCDC47-207ENST00000612558 CORO2BQ9UQ03 480 aa8.46□□□□□ -1.06
CCDC47-207ENST00000612558 AP4S1Q9Y587 144 aa8.46□□□□□ -1.06
CCDC47-207ENST00000612558 SNX11Q9Y5W9 270 aa8.46□□□□□ -1.06
CCDC47-207ENST00000612558 ARID1BQ8NFD5 2236 aaPredicted RBP8.46□□□□□ -1.06
CCDC47-207ENST00000612558 TP53BP1Q12888 1972 aaPredicted RBP8.46□□□□□ -1.06
CCDC47-207ENST00000612558 VCANP13611 3396 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 C1orf226A1L170 272 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 RHPN2P1A8MT19 583 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 C4orf51C9J302 202 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 H0YGG7 62 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 GSTA4O15217 222 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 ZSCAN9O15535 394 aaPredicted RBP8.45□□□□□ -1.06
CCDC47-207ENST00000612558 C6orf47O95873 294 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 PROS1P07225 676 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 SMIM10L1P0DMW3 83 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 PVRP15151 417 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 NCK1P16333 377 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 ENGP17813 658 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 GGT1P19440 569 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 EFNA1P20827 205 aaPredicted RBP8.45□□□□□ -1.06
CCDC47-207ENST00000612558 CDH3P22223 829 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 CAPZBP47756 277 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 ALDH9A1P49189 494 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 EPHA4P54764 986 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 RAB8AP61006 207 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 ARF3P61204 181 aaPredicted RBP8.45□□□□□ -1.06
CCDC47-207ENST00000612558 HBA1P69905 142 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 BTN3A2P78410 334 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 SRSF5Q13243 272 aaKnown RBP8.45□□□□□ -1.06
CCDC47-207ENST00000612558 PRSS53Q2L4Q9 553 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 PLK5Q496M5 336 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 MTX3Q5HYI7 312 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 NDUFAF5Q5TEU4 345 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 TMEM126BQ8IUX1 230 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 MICU2Q8IYU8 434 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 MMP21Q8N119 569 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 DTWD1Q8N5C7 304 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 UTP15Q8TED0 518 aaKnown RBP8.45□□□□□ -1.06
CCDC47-207ENST00000612558 ZFP90Q8TF47 636 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 SMIM10Q96HG1 83 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 REXO5Q96IC2 774 aaKnown RBP8.45□□□□□ -1.06
CCDC47-207ENST00000612558 NSMCE2Q96MF7 247 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 ELF4Q99607 663 aaPredicted RBP8.45□□□□□ -1.06
CCDC47-207ENST00000612558 GRIP2Q9C0E4 1043 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 COPS7BQ9H9Q2 264 aaPredicted RBP8.45□□□□□ -1.06
CCDC47-207ENST00000612558 TPT1P8Q9HAU6 139 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 C1GALT1Q9NS00 363 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 CCM2LQ9NUG4 571 aaPredicted RBP8.45□□□□□ -1.06
CCDC47-207ENST00000612558 TMEM74BQ9NUR3 256 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 ARMC1Q9NVT9 282 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 LYARQ9NX58 379 aaKnown RBP8.45□□□□□ -1.06
CCDC47-207ENST00000612558 TEX10Q9NXF1 929 aaPredicted RBP8.45□□□□□ -1.06
CCDC47-207ENST00000612558 PILRBQ9UKJ0 227 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 ASB4Q9Y574 426 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 SCN3AQ9NY46 2000 aa8.45□□□□□ -1.06
CCDC47-207ENST00000612558 LOC105369274A0A096LPK9 316 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 LOC102723532A0A0G2JNH3 316 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 TCRBV5S2A0A599 114 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 DHRS12A0PJE2 317 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 TMEM221A6NGB7 291 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 M0R296 226 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 CASQ2O14958 399 aaPredicted RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 PDPK1O15530 556 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 PRAMEF10O60809 474 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 GPIP06744 558 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 ABCB1P08183 1280 aaPredicted RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 ZNF888P0CJ79 500 aaPredicted RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 ST6GAL1P15907 406 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 ZNF10P21506 573 aaPredicted RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 IL10P22301 178 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 PSMA4P25789 261 aaKnown RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 SOX11P35716 441 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 FRKP42685 505 aaPredicted RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 PCBP4P57723 403 aaKnown RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 PPP1CAP62136 330 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 BNIP3Q12983 259 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 CLN3Q13286 438 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 CYP51A1Q16850 503 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 ZC3H12BQ5HYM0 836 aaKnown RBP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 FRMPD2BQ6IN97 320 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 ERICH5Q6P6B1 374 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 ABHD13Q7L211 337 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 GPR155Q7Z3F1 870 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.44□□□□□ -1.06
CCDC47-207ENST00000612558 OR4N4Q8N0Y3 316 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 SLC25A45Q8N413 288 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 ARL10Q8N8L6 244 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 OR52E4Q8NGH9 312 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 CANT1Q8WVQ1 401 aa8.44□□□□□ -1.06
CCDC47-207ENST00000612558 OR5P2Q8WZ92 322 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms