RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 LINC00615Q96LM1 132 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 KXD1Q9BQD3 176 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 MENTQ9BUN1 341 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 AICDAQ9GZX7 198 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 DPEP2Q9H4A9 486 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 EHD1Q9H4M9 534 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 SYNPO2LQ9H987 977 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 ANKRA2Q9H9E1 313 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 TBC1D23Q9NUY8 699 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 SCN2AQ99250 2005 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 BOLA2-SMG1P6H3BVE0 249 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 FFAR1O14842 300 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 NARSO43776 548 aaKnown RBP13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 CD72P21854 359 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 FCARP24071 287 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 ACVR2AP27037 513 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 BSGP35613 385 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 CCR3P51677 355 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 MANFP55145 182 aaKnown RBP13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 PHEXP78562 749 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 LSM11P83369 360 aaKnown RBP eCLIP13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 MLF2Q15773 248 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 TMEM52BQ4KMG9 183 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 C2orf27AQ580R0 203 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 PERM1Q5SV97 790 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 KHDRBS2Q5VWX1 349 aaKnown RBP13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 Q6ZNX1 250 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 LRRTM4Q86VH4 590 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 COMTD1Q86VU5 262 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 DCUN1D3Q8IWE4 304 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 TMCO5AQ8N6Q1 288 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 HRASLS5Q96KN8 279 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 YIPF4Q9BSR8 244 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 COPS4Q9BT78 406 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 ROGDIQ9GZN7 287 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 KLHL31Q9H511 634 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 ACER3Q9NUN7 267 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 ZNF226Q9NYT6 803 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 GPR34Q9UPC5 381 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 COL4A3Q01955 1670 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 C17orf113A0A1B0GUU1 675 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 C4orf51C9J302 202 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 SH3BP5O60239 455 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 TPST2O60704 377 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 GABARAPO95166 117 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 SOX14O95416 240 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 NADKO95544 446 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 RB1P06400 928 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 STSP08842 583 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 KELP23276 732 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 PPIBP23284 216 aaKnown RBP13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 PTX3P26022 381 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 GRK5P34947 590 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 PBX2P40425 430 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 MAGEA10P43363 369 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 DSTNP60981 165 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 TP53BP2Q13625 1128 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 C9orf50Q5SZB4 431 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 PSRC1Q6PGN9 363 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 P2RY8Q86VZ1 359 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 MEX3DQ86XN8 651 aaKnown RBP13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 P3H2Q8IVL5 708 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 OR4D11Q8NGI4 311 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 SLC38A5Q8WUX1 472 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 METTL2AQ96IZ6 378 aaKnown RBP13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 FERD3LQ96RJ6 166 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 INSM2Q96T92 566 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 PITX2Q99697 317 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 C17orf62Q9BQA9 187 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 SERHL2Q9H4I8 314 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 CTPS2Q9NRF8 586 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 CORO2BQ9UQ03 480 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 PCDHGA2Q9Y5H1 932 aa13.41□□□□□ -0.26
PCDHGA3-202ENST00000612467 NUP210Q8TEM1 1887 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 IGKV1-8A0A0C4DH67 115 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 TRBV4-1A0A0J9YWV2 114 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 RFXAPO00287 272 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 KAT7O95251 611 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 GASTP01350 101 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 CD36P16671 472 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 TGFBR2P37173 567 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 FCHO2Q0JRZ9 810 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 DEPDC1Q5TB30 811 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 AGBL4Q5VU57 503 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 TRIM40Q6P9F5 258 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 LCTLQ6UWM7 567 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 ZNF765Q7L2R6 523 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 UBE3DQ7Z6J8 389 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 LACC1Q8IV20 430 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 OR5K2Q8NHB8 316 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 SH3YL1Q96HL8 342 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 C12orf66Q96MD2 445 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 MS4A8Q9BY19 250 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 ZBTB20Q9HC78 741 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 GON4LQ3T8J9 2241 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 DOCK8Q8NF50 2099 aa13.4□□□□□ -0.26
PCDHGA3-202ENST00000612467 PRAMEF27A3QJZ7 478 aa13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 VEGFDO43915 354 aa13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 ARAFP10398 606 aa13.4□□□□□ -0.27
PCDHGA3-202ENST00000612467 PIK3CBP42338 1070 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms