RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 GTF2H2CQ6P1K8 395 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 CCDC81Q6ZN84 652 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 Q6ZSR9 355 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 PLD3Q8IV08 490 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 LILRA2Q8N149 483 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 KRT78Q8N1N4 520 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 CSNK1A1LQ8N752 337 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 CDYL2Q8N8U2 506 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 ZSCAN1Q8NBB4 408 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 MFSD9Q8NBP5 474 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 CAMKVQ8NCB2 501 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 FAM156AQ8NDB6 213 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 RNF31Q96EP0 1072 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 GBP5Q96PP8 586 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 BTBD9Q96Q07 612 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 GPR87Q9BY21 358 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 PITHD1Q9GZP4 211 aaPredicted RBP8.38□□□□□ -1.07
SMAD4-217ENST00000611848 EHD1Q9H4M9 534 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 CXorf56Q9H5V9 222 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 GPN2Q9H9Y4 310 aaPredicted RBP8.38□□□□□ -1.07
SMAD4-217ENST00000611848 STARD5Q9NSY2 213 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 GID8Q9NWU2 228 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 ZIM2Q9NZV7 527 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 OPTCQ9UBM4 332 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 SCN3AQ9NY46 2000 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 A0A1B0GX78 115 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 DSCR3O14972 297 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 ANGPT2O15123 496 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 OR1F1O43749 312 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 LCMT2O60294 686 aaKnown RBP8.37□□□□□ -1.07
SMAD4-217ENST00000611848 EEDO75530 441 aaKnown RBP8.37□□□□□ -1.07
SMAD4-217ENST00000611848 SLC22A3O75751 556 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 CAPN1P07384 714 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 RAB40ALP0C0E4 278 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 HSD17B1P14061 328 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 UQCRBP14927 111 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 LIFP15018 202 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 EPB42P16452 691 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 TCN1P20061 433 aaPredicted RBP8.37□□□□□ -1.07
SMAD4-217ENST00000611848 ALAS2P22557 587 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 GSTM2P28161 218 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 AHRP35869 848 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 BCL6P41182 706 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 CASP2P42575 452 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 PIK3CGP48736 1102 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 SLC7A2P52569 658 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 AQP4P55087 323 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 NME5P56597 212 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 RPS15P62841 145 aaKnown RBP8.37□□□□□ -1.07
SMAD4-217ENST00000611848 REEP5Q00765 189 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 EMX2Q04743 252 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 PCDH1Q08174 1060 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 DNASE1L3Q13609 305 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 NDUFA9Q16795 377 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 SMU1Q2TAY7 513 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 SLCO4C1Q6ZQN7 724 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 TTLL10Q6ZVT0 673 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 VN1R4Q7Z5H5 301 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 ASPGQ86U10 573 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 VASH2Q86V25 355 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 SPATA24Q86W54 205 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 APLFQ8IW19 511 aaPredicted RBP8.37□□□□□ -1.07
SMAD4-217ENST00000611848 SLC15A3Q8IY34 581 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 TMEM102Q8N9M5 508 aaPredicted RBP8.37□□□□□ -1.07
SMAD4-217ENST00000611848 CATSPER1Q8NEC5 780 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 ADCY4Q8NFM4 1077 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 TTLQ8NG68 377 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 OR4F6Q8NGB9 312 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 METTL6Q8TCB7 284 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 SLC13A3Q8WWT9 602 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 TM4SF19Q96DZ7 209 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 SPDL1Q96EA4 605 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 MVB12AQ96EY5 273 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 SLC45A3Q96JT2 553 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 TEX37Q96LM6 180 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 CDK15Q96Q40 435 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 MYCBPQ99417 103 aaPredicted RBP8.37□□□□□ -1.07
SMAD4-217ENST00000611848 PCDHAC1Q9H158 963 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 CHST8Q9H2A9 424 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 NT5DC2Q9H857 520 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 IPPKQ9H8X2 491 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 AKIRIN1Q9H9L7 192 aaPredicted RBP8.37□□□□□ -1.07
SMAD4-217ENST00000611848 DHCR7Q9UBM7 475 aaKnown RBP8.37□□□□□ -1.07
SMAD4-217ENST00000611848 NDOR1Q9UHB4 597 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 CCL27Q9Y4X3 112 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 ANGPTL3Q9Y5C1 460 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 PCDHGA6Q9Y5G7 932 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 CACNA1GO43497 2377 aa8.37□□□□□ -1.07
SMAD4-217ENST00000611848 DSPP15924 2871 aaKnown RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 DYTNA2CJ06 578 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 FAM234BA2RU67 622 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 ASPDHA6ND91 283 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 ZNF891A8MT65 544 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 C9J4A7 227 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 K7ENP7 123 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 NME4O00746 187 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 TERTO14746 1132 aaKnown RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 LSM1O15116 133 aaKnown RBP8.36□□□□□ -1.07
SMAD4-217ENST00000611848 EFSO43281 561 aa8.36□□□□□ -1.07
SMAD4-217ENST00000611848 KATNA1O75449 491 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms