RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 KCNJ2P63252 427 aa16.05■□□□□ 0.16
CHMP4A-211ENST00000609024 SIX1Q15475 284 aaPredicted RBP16.05■□□□□ 0.16
CHMP4A-211ENST00000609024 NXPE4Q6UWF7 544 aa16.05■□□□□ 0.16
CHMP4A-211ENST00000609024 ANKRD53Q8N9V6 530 aa16.05■□□□□ 0.16
CHMP4A-211ENST00000609024 TTLQ8NG68 377 aa16.05■□□□□ 0.16
CHMP4A-211ENST00000609024 OR14A16Q8NHC5 309 aa16.05■□□□□ 0.16
CHMP4A-211ENST00000609024 GAL3ST3Q96A11 431 aa16.05■□□□□ 0.16
CHMP4A-211ENST00000609024 SMIM10Q96HG1 83 aa16.05■□□□□ 0.16
CHMP4A-211ENST00000609024 YIPF4Q9BSR8 244 aa16.05■□□□□ 0.16
CHMP4A-211ENST00000609024 COPS7BQ9H9Q2 264 aaPredicted RBP16.05■□□□□ 0.16
CHMP4A-211ENST00000609024 TUBA8Q9NY65 449 aaPredicted RBP16.05■□□□□ 0.16
CHMP4A-211ENST00000609024 BOKQ9UMX3 212 aaPredicted RBP16.05■□□□□ 0.16
CHMP4A-211ENST00000609024 FBN3Q75N90 2809 aa16.04■□□□□ 0.16
CHMP4A-211ENST00000609024 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.04■□□□□ 0.16
CHMP4A-211ENST00000609024 ATE1O95260 518 aa16.04■□□□□ 0.16
CHMP4A-211ENST00000609024 ENO2P09104 434 aaPredicted RBP16.04■□□□□ 0.16
CHMP4A-211ENST00000609024 ZNF75DP51815 510 aa16.04■□□□□ 0.16
CHMP4A-211ENST00000609024 TBL3Q12788 808 aaKnown RBP16.04■□□□□ 0.16
CHMP4A-211ENST00000609024 RUNX2Q13950 521 aa16.04■□□□□ 0.16
CHMP4A-211ENST00000609024 DAZAP2Q15038 168 aaPredicted RBP16.04■□□□□ 0.16
CHMP4A-211ENST00000609024 SF3B4Q15427 424 aaKnown RBP eCLIP16.04■□□□□ 0.16
CHMP4A-211ENST00000609024 HYAL4Q2M3T9 481 aa16.04■□□□□ 0.16
CHMP4A-211ENST00000609024 SLC22A10Q63ZE4 541 aa16.04■□□□□ 0.16
CHMP4A-211ENST00000609024 TMEM198Q66K66 360 aa16.04■□□□□ 0.16
CHMP4A-211ENST00000609024 MAATS1Q7Z4T9 603 aa16.04■□□□□ 0.16
CHMP4A-211ENST00000609024 THOC6Q86W42 341 aaKnown RBP16.04■□□□□ 0.16
CHMP4A-211ENST00000609024 LRRN4CLQ8ND94 238 aa16.04■□□□□ 0.16
CHMP4A-211ENST00000609024 RUNDC3BQ96NL0 473 aa16.04■□□□□ 0.16
CHMP4A-211ENST00000609024 ARHGEF9O43307 516 aa16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 IL2RAP01589 272 aa16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 KRT14P02533 472 aa16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 MAGEA6P43360 314 aa16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 RNF4P78317 190 aa16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 EFTUD2Q15029 972 aaKnown RBP eCLIP16.03■□□□□ 0.163e-6■■■■□ 20.3
CHMP4A-211ENST00000609024 PCBP2Q15366 365 aaKnown RBP eCLIP16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 KCTD19Q17RG1 926 aaPredicted RBP16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 ANKRD22Q5VYY1 191 aa16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 TRIM40Q6P9F5 258 aa16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 CHSY3Q70JA7 882 aa16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 KLHDC8AQ8IYD2 350 aa16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 OR8K3Q8NH51 312 aa16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 JSRP1Q96MG2 331 aaPredicted RBP16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 SERPINB12Q96P63 405 aa16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 EGFL8Q99944 293 aa16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 ALOXE3Q9BYJ1 711 aa16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 SLC22A14Q9Y267 594 aa16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 ATG4BQ9Y4P1 393 aa16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 PCDHGB3Q9Y5G1 929 aa16.03■□□□□ 0.16
CHMP4A-211ENST00000609024 C15orf38-AP3S2A0A0A6YYH1 394 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 C17orf105B2RV13 164 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 DYRK3O43781 588 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 CTNSO60931 367 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 HEXAP06865 529 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 CCL3P10147 92 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 EPXP11678 715 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 COX7A2P14406 83 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 GNAZP19086 355 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 PIGAP37287 484 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 PLA2G16P53816 162 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 CDKN2DP55273 166 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 NKX6-1P78426 367 aaPredicted RBP16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 TGM3Q08188 693 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 SERTAD2Q14140 314 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 ULK2Q8IYT8 1036 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 KRT78Q8N1N4 520 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 RELL2Q8NC24 303 aaPredicted RBP16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 C2CD4AQ8NCU7 369 aaPredicted RBP16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 MCUQ8NE86 351 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 SLC22A8Q8TCC7 542 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 CAPZA3Q96KX2 299 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 SPRR3Q9UBC9 169 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 ZNF629Q9UEG4 869 aaPredicted RBP16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 VTI1BQ9UEU0 232 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 SPACA6W5XKT8 324 aa16.02■□□□□ 0.16
CHMP4A-211ENST00000609024 MYOCOSA0A1B0GUC4 107 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 ANKDD1BA6NHY2 528 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 AHRRA9YTQ3 701 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 C4orf51C9J302 202 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 CES2O00748 559 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 GSTM2P28161 218 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 DCAF7P61962 342 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 FOXO1Q12778 655 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 RBM20Q5T481 1227 aaKnown RBP16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 SHEQ5VZ18 495 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 TMIGD1Q6UXZ0 262 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 C7orf57Q8NEG2 295 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 SLC2A12Q8TD20 617 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 KIAA1191Q96A73 305 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 MS4A6EQ96DS6 147 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 HSPBAP1Q96EW2 488 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 SERINC2Q96SA4 455 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 SH3GL2Q99962 352 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 REPIN1Q9BWE0 567 aaKnown RBP16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 REXO4Q9GZR2 422 aaKnown RBP16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 ZFP64Q9NPA5 681 aa16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 SEMA4BQ9NPR2 832 aaPredicted RBP16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 PPANQ9NQ55 473 aaKnown RBP16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 BEX4Q9NWD9 120 aaPredicted RBP16.01■□□□□ 0.15
CHMP4A-211ENST00000609024 CTAGE15A4D2H0 777 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms