RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 FAM83CQ9BQN1 747 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 RANGRFQ9HD47 186 aaPredicted RBP21.36■■□□□ 1.01
SHANK2-220ENST00000608988 MYNNQ9NPC7 610 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 BACE2Q9Y5Z0 518 aa21.36■■□□□ 1.01
SHANK2-220ENST00000608988 IRGMA1A4Y4 181 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 A8MV72 311 aaPredicted RBP21.35■■□□□ 1.01
SHANK2-220ENST00000608988 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.35■■□□□ 1.01
SHANK2-220ENST00000608988 STK25O00506 426 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 CPEP16870 476 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 CHI3L1P36222 383 aaPredicted RBP21.35■■□□□ 1.01
SHANK2-220ENST00000608988 SMIM11AP58511 58 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 SNRPD1P62314 119 aaKnown RBP21.35■■□□□ 1.01
SHANK2-220ENST00000608988 SMAD3P84022 425 aaKnown RBP21.35■■□□□ 1.01
SHANK2-220ENST00000608988 ALDH6A1Q02252 535 aaKnown RBP21.35■■□□□ 1.01
SHANK2-220ENST00000608988 ZNF91Q05481 1191 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 DOC2BQ14184 412 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 SNAP47Q5SQN1 464 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 LCN1P1Q5VSP4 162 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 MED27Q6P2C8 311 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 HUS1BQ8NHY5 278 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 PPCDCQ96CD2 204 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 CASD1Q96PB1 797 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 C11orf54Q9H0W9 315 aaPredicted RBP21.35■■□□□ 1.01
SHANK2-220ENST00000608988 MMP28Q9H239 520 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 MIXL1Q9H2W2 232 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 ABCB9Q9NP78 766 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 STOX2Q9P2F5 926 aaPredicted RBP21.35■■□□□ 1.01
SHANK2-220ENST00000608988 NUFIP1Q9UHK0 495 aaKnown RBP21.35■■□□□ 1.01
SHANK2-220ENST00000608988 DIMT1Q9UNQ2 313 aaKnown RBP21.35■■□□□ 1.01
SHANK2-220ENST00000608988 POLR1CO15160 346 aaPredicted RBP21.35■■□□□ 1.01
SHANK2-220ENST00000608988 CDRT1O95170 752 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 FURINP09958 794 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 AZGP1P25311 298 aaKnown RBP21.35■■□□□ 1.01
SHANK2-220ENST00000608988 GKP32189 559 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 IRS1P35568 1242 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 SPINT3P49223 89 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 WDR5P61964 334 aaKnown RBP21.35■■□□□ 1.01
SHANK2-220ENST00000608988 METAP1DQ6UB28 335 aaPredicted RBP21.35■■□□□ 1.01
SHANK2-220ENST00000608988 Q6ZNB5 142 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 PCSK9Q8NBP7 692 aaKnown RBP21.35■■□□□ 1.01
SHANK2-220ENST00000608988 ENKURQ8TC29 256 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 WFDC5Q8TCV5 224 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 ZFYVE19Q96K21 471 aa21.35■■□□□ 1.01
SHANK2-220ENST00000608988 WRAP53Q9BUR4 548 aaKnown RBP21.35■■□□□ 1.01
SHANK2-220ENST00000608988 TXNL4BQ9NX01 149 aaKnown RBP21.35■■□□□ 1.01
SHANK2-220ENST00000608988 ARHGEF33A8MVX0 844 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 ZNF197O14709 1029 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 TFECO14948 347 aaPredicted RBP21.34■■□□□ 1.01
SHANK2-220ENST00000608988 SGTAO43765 313 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 TMCC2O75069 709 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 CATP04040 527 aaKnown RBP21.34■■□□□ 1.01
SHANK2-220ENST00000608988 CKMT1AP12532 417 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 POU1F1P28069 291 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 GSTM5P46439 218 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 TNK1Q13470 666 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 NAE1Q13564 534 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 SF1Q15637 639 aaKnown RBP21.34■■□□□ 1.01
SHANK2-220ENST00000608988 TAB1Q15750 504 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 CCDC58Q4VC31 144 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 REEP3Q6NUK4 255 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 MZT2BQ6NZ67 158 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 PRSS55Q6UWB4 352 aaPredicted RBP21.34■■□□□ 1.01
SHANK2-220ENST00000608988 TIFAQ96CG3 184 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 TSSK6Q9BXA6 273 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 SUV39H2Q9H5I1 410 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 ANKRA2Q9H9E1 313 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 C11orf16Q9NQ32 467 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 CLEC2DQ9UHP7 191 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 TMPRSS11EQ9UL52 423 aa21.34■■□□□ 1.01
SHANK2-220ENST00000608988 A8MX80 341 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 ZNF821O75541 412 aaPredicted RBP21.33■■□□□ 1.01
SHANK2-220ENST00000608988 RAB36O95755 333 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 HBQ1P09105 142 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 IL12RB1P42701 662 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 IKBIPQ70UQ0 350 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 DNAJB7Q7Z6W7 309 aaPredicted RBP21.33■■□□□ 1.01
SHANK2-220ENST00000608988 RAVER1Q8IY67 606 aaKnown RBP21.33■■□□□ 1.01
SHANK2-220ENST00000608988 FAM26EQ8N5C1 309 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 APOBEC4Q8WW27 367 aaKnown RBP21.33■■□□□ 1.01
SHANK2-220ENST00000608988 WDR34Q96EX3 536 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 TRMT61AQ96FX7 289 aaKnown RBP21.33■■□□□ 1.01
SHANK2-220ENST00000608988 DIRAS2Q96HU8 199 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 IL4I1Q96RQ9 567 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 CPEB1Q9BZB8 566 aaKnown RBP21.33■■□□□ 1.01
SHANK2-220ENST00000608988 PLSCR3Q9NRY6 295 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 PLEKHB1Q9UF11 243 aaPredicted RBP21.33■■□□□ 1.01
SHANK2-220ENST00000608988 PHF11Q9UIL8 331 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 HCN2Q9UL51 889 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 RAB23Q9ULC3 237 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 GABRQQ9UN88 632 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 BOLA1Q9Y3E2 137 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 PCDHB7Q9Y5E2 793 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 SNX11Q9Y5W9 270 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 KIAA1671Q9BY89 1806 aa21.33■■□□□ 1.01
SHANK2-220ENST00000608988 RECKO95980 971 aa21.32■■□□□ 1
SHANK2-220ENST00000608988 TSPAN19P0C672 248 aa21.32■■□□□ 1
SHANK2-220ENST00000608988 LHCGRP22888 699 aa21.32■■□□□ 1
SHANK2-220ENST00000608988 XKP51811 444 aa21.32■■□□□ 1
SHANK2-220ENST00000608988 DSTNP60981 165 aa21.32■■□□□ 1
SHANK2-220ENST00000608988 RPS13P62277 151 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms