RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 MS4A12Q9NXJ0 267 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 VTI1BQ9UEU0 232 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 TBK1Q9UHD2 729 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 TRPS1Q9UHF7 1281 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 ESPNB1AK53 854 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 GOLGA8RI6L899 631 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 SAP18O00422 153 aaKnown RBP13.39□□□□□ -0.27
PRDM16-210ENST00000607632 PPP6CO00743 305 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 GLRA3O75311 464 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 IMPDH1P20839 514 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 NEK2P51955 445 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 CDH13P55290 713 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 ARG2P78540 354 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 CLCQ05315 142 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 SLC18A2Q05940 514 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 SRSF1Q07955 248 aaKnown RBP eCLIP13.39□□□□□ -0.27
PRDM16-210ENST00000607632 SERTAD2Q14140 314 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 ELAVL1Q15717 326 aaKnown RBP13.39□□□□□ -0.27
PRDM16-210ENST00000607632 MEP1AQ16819 746 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 EMBQ6PCB8 327 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 RPS27LQ71UM5 84 aaKnown RBP13.39□□□□□ -0.27
PRDM16-210ENST00000607632 MILR1Q7Z6M3 343 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 SLC22A9Q8IVM8 553 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 CISD2Q8N5K1 135 aaKnown RBP13.39□□□□□ -0.27
PRDM16-210ENST00000607632 SLC5A8Q8N695 610 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 B3GNT7Q8NFL0 401 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 ATP6V1E2Q96A05 226 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 ANKRD9Q96BM1 317 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-210ENST00000607632 C19orf60Q96EN9 201 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 ZNF382Q96SR6 550 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 SERPINI1Q99574 410 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 SORBS1Q9BX66 1292 aaKnown RBP13.39□□□□□ -0.27
PRDM16-210ENST00000607632 TRIM45Q9H8W5 580 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-210ENST00000607632 SEMA4BQ9NPR2 832 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-210ENST00000607632 PLA2G3Q9NZ20 509 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 STMN3Q9NZ72 180 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 PHF11Q9UIL8 331 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 ZNF223Q9UK11 482 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-210ENST00000607632 ASB4Q9Y574 426 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 COPG1Q9Y678 874 aaKnown RBP13.39□□□□□ -0.27
PRDM16-210ENST00000607632 MAST4O15021 2626 aa13.39□□□□□ -0.27
PRDM16-210ENST00000607632 TCP11X1B4DZS4 312 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 G3V2L1 256 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 TMPRSS11DO60235 418 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 MAN1A2O60476 641 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 VPS4BO75351 444 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 SH3BGRLO75368 114 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 PROCP04070 461 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 PPP2R1BP30154 601 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 CRHR1P34998 444 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 RAP1GDS1P52306 607 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 HNRNPH2P55795 449 aaKnown RBP13.38□□□□□ -0.27
PRDM16-210ENST00000607632 TAS2R50P59544 299 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 TNFRSF17Q02223 184 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 ZNF33BQ06732 778 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 SLC13A2Q13183 592 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 SLAMF1Q13291 335 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 BIKQ13323 160 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 ZNF324BQ6AW86 544 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-210ENST00000607632 GPR180Q86V85 440 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 BEST3Q8N1M1 668 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 RIBC1Q8N443 379 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-210ENST00000607632 KIF2BQ8N4N8 673 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 MDS2Q8NDY4 140 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 EPS8L3Q8TE67 593 aaKnown RBP13.38□□□□□ -0.27
PRDM16-210ENST00000607632 CAVIN3Q969G5 261 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 SLC29A3Q9BZD2 475 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 BRF2Q9HAW0 419 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 LYARQ9NX58 379 aaKnown RBP13.38□□□□□ -0.27
PRDM16-210ENST00000607632 MKS1Q9NXB0 559 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 ADAM29Q9UKF5 820 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 VPS4AQ9UN37 437 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 ATG4BQ9Y4P1 393 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 SPACA6W5XKT8 324 aa13.38□□□□□ -0.27
PRDM16-210ENST00000607632 A8MUI8 341 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 FOXO6A8MYZ6 492 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 PROM1O43490 865 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 PLIN3O60664 434 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 EEDO75530 441 aaKnown RBP13.37□□□□□ -0.27
PRDM16-210ENST00000607632 MYO1DO94832 1006 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 SUPT7LO94864 414 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 CBX6O95503 412 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 CPN2P22792 545 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 TRHRP34981 398 aaPredicted RBP13.37□□□□□ -0.27
PRDM16-210ENST00000607632 SLCO1A2P46721 670 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 UQCRFS1P47985 274 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 CLCN2P51788 898 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 MLF1P58340 268 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 NAA20P61599 178 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 IFT88Q13099 833 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 TUBA3CQ13748 450 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 CCDC153Q494R4 210 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 FCRLBQ6BAA4 426 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 TUBA3EQ6PEY2 450 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 ZYG11AQ6WRX3 759 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 RPS19BP1Q86WX3 136 aaKnown RBP13.37□□□□□ -0.27
PRDM16-210ENST00000607632 NUDT13Q86X67 352 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 METTL4Q8N3J2 472 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 TMEM132CQ8N3T6 1108 aa13.37□□□□□ -0.27
PRDM16-210ENST00000607632 MREGQ8N565 214 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms