RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 CCNG1P51959 295 aa17.94■□□□□ 0.46
CTSA-217ENST00000607482 HNRNPFP52597 415 aaKnown RBP17.94■□□□□ 0.46
CTSA-217ENST00000607482 MLF1P58340 268 aa17.94■□□□□ 0.46
CTSA-217ENST00000607482 SLAMF1Q13291 335 aa17.94■□□□□ 0.46
CTSA-217ENST00000607482 PCBP2Q15366 365 aaKnown RBP eCLIP17.94■□□□□ 0.46
CTSA-217ENST00000607482 ELAVL1Q15717 326 aaKnown RBP17.94■□□□□ 0.46
CTSA-217ENST00000607482 CYP20A1Q6UW02 462 aa17.94■□□□□ 0.46
CTSA-217ENST00000607482 GALNTL5Q7Z4T8 443 aa17.94■□□□□ 0.46
CTSA-217ENST00000607482 FJX1Q86VR8 437 aa17.94■□□□□ 0.46
CTSA-217ENST00000607482 MDS2Q8NDY4 140 aa17.94■□□□□ 0.46
CTSA-217ENST00000607482 CSF3RQ99062 836 aa17.94■□□□□ 0.46
CTSA-217ENST00000607482 NPAS2Q99743 824 aa17.94■□□□□ 0.46
CTSA-217ENST00000607482 MAPKAP1Q9BPZ7 522 aa17.94■□□□□ 0.46
CTSA-217ENST00000607482 RHOXF2Q9BQY4 288 aa17.94■□□□□ 0.46
CTSA-217ENST00000607482 FUT8Q9BYC5 575 aa17.94■□□□□ 0.46
CTSA-217ENST00000607482 NOL11Q9H8H0 719 aaKnown RBP17.94■□□□□ 0.46
CTSA-217ENST00000607482 MS4A12Q9NXJ0 267 aa17.94■□□□□ 0.46
CTSA-217ENST00000607482 PHF11Q9UIL8 331 aa17.94■□□□□ 0.46
CTSA-217ENST00000607482 ERVK-11Q9UQG0 969 aa17.94■□□□□ 0.46
CTSA-217ENST00000607482 MYOCOSA0A1B0GUC4 107 aa17.93■□□□□ 0.46
CTSA-217ENST00000607482 CYR61O00622 381 aa17.93■□□□□ 0.46
CTSA-217ENST00000607482 SIX3O95343 332 aaPredicted RBP17.93■□□□□ 0.46
CTSA-217ENST00000607482 TBX6O95947 436 aaPredicted RBP17.93■□□□□ 0.46
CTSA-217ENST00000607482 LDLRP01130 860 aa17.93■□□□□ 0.46
CTSA-217ENST00000607482 SNRPAP09012 282 aaKnown RBP17.93■□□□□ 0.46
CTSA-217ENST00000607482 PPP2R1BP30154 601 aa17.93■□□□□ 0.46
CTSA-217ENST00000607482 HLCSP50747 726 aa17.93■□□□□ 0.46
CTSA-217ENST00000607482 SRSF11Q05519 484 aaKnown RBP17.93■□□□□ 0.46
CTSA-217ENST00000607482 TECRLQ5HYJ1 363 aa17.93■□□□□ 0.46
CTSA-217ENST00000607482 UBAP2Q5T6F2 1119 aaKnown RBP17.93■□□□□ 0.46
CTSA-217ENST00000607482 DEPDC1Q5TB30 811 aa17.93■□□□□ 0.46
CTSA-217ENST00000607482 C1QL3Q5VWW1 255 aa17.93■□□□□ 0.46
CTSA-217ENST00000607482 METTL2BQ6P1Q9 378 aaKnown RBP17.93■□□□□ 0.46
CTSA-217ENST00000607482 TRMT10CQ7L0Y3 403 aaKnown RBP17.93■□□□□ 0.46
CTSA-217ENST00000607482 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.93■□□□□ 0.46
CTSA-217ENST00000607482 PLD6Q8N2A8 252 aaKnown RBP17.93■□□□□ 0.46
CTSA-217ENST00000607482 TMEM52Q8NDY8 209 aa17.93■□□□□ 0.46
CTSA-217ENST00000607482 NFAM1Q8NET5 270 aaPredicted RBP17.93■□□□□ 0.46
CTSA-217ENST00000607482 OR14A16Q8NHC5 309 aa17.93■□□□□ 0.46
CTSA-217ENST00000607482 HES7Q9BYE0 225 aa17.93■□□□□ 0.46
CTSA-217ENST00000607482 OR8D2Q9GZM6 311 aa17.93■□□□□ 0.46
CTSA-217ENST00000607482 DMRT3Q9NQL9 472 aa17.93■□□□□ 0.46
CTSA-217ENST00000607482 XPR1Q9UBH6 696 aa17.93■□□□□ 0.46
CTSA-217ENST00000607482 SUCOQ9UBS9 1254 aaKnown RBP17.93■□□□□ 0.46
CTSA-217ENST00000607482 COPS7AQ9UBW8 275 aa17.93■□□□□ 0.46
CTSA-217ENST00000607482 ZNF180Q9UJW8 692 aa17.93■□□□□ 0.46
CTSA-217ENST00000607482 CPAMD8Q8IZJ3 1885 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 SVILO95425 2214 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 USP9YO00507 2555 aaPredicted RBP17.92■□□□□ 0.46
CTSA-217ENST00000607482 LRRC14BA6NHZ5 514 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 C17orf105B2RV13 164 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 KLK8O60259 260 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 LDB3O75112 727 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 BUD31P41223 144 aaPredicted RBP17.92■□□□□ 0.46
CTSA-217ENST00000607482 SSR4P51571 173 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 RPS13P62277 151 aaKnown RBP17.92■□□□□ 0.46
CTSA-217ENST00000607482 ID2Q02363 134 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 PCDH1Q08174 1060 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.92■□□□□ 0.46
CTSA-217ENST00000607482 ZNF324BQ6AW86 544 aaPredicted RBP17.92■□□□□ 0.46
CTSA-217ENST00000607482 HSDL2Q6YN16 418 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 MAMDC2Q7Z304 686 aaPredicted RBP17.92■□□□□ 0.46
CTSA-217ENST00000607482 UBE3DQ7Z6J8 389 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 GPR180Q86V85 440 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 SREK1Q8WXA9 508 aaKnown RBP17.92■□□□□ 0.46
CTSA-217ENST00000607482 MTFMTQ96DP5 389 aaKnown RBP17.92■□□□□ 0.46
CTSA-217ENST00000607482 RBM18Q96H35 190 aaKnown RBP17.92■□□□□ 0.46
CTSA-217ENST00000607482 MAGED4Q96JG8 741 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 GPR78Q96P69 363 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 DGAT2Q96PD7 388 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 MRPL57Q9BQC6 102 aaKnown RBP17.92■□□□□ 0.46
CTSA-217ENST00000607482 WDR41Q9HAD4 459 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 ZNF358Q9NW07 568 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 SH3BGRL2Q9UJC5 107 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 RNF11Q9Y3C5 154 aa17.92■□□□□ 0.46
CTSA-217ENST00000607482 NPIPA5E9PKD4 350 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 H0YIV9 168 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 KLRC4-KLRK1H3BQV0 150 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 ITGA10O75578 1167 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 MST1P26927 711 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 IFT88Q13099 833 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 E2F2Q14209 437 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 ZRSR2Q15696 482 aaKnown RBP17.91■□□□□ 0.46
CTSA-217ENST00000607482 KRTCAP3Q53RY4 240 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 ZNF793Q6ZN11 406 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 CYP4Z2PQ8N1L4 340 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 RNF175Q8N4F7 328 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 APCDD1LQ8NCL9 501 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 MORN4Q8NDC4 146 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 DCAKDQ8WVC6 231 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 ASB15Q8WXK1 588 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 MTBPQ96DY7 904 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 SCMH1Q96GD3 660 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 SORBS1Q9BX66 1292 aaKnown RBP17.91■□□□□ 0.46
CTSA-217ENST00000607482 TSPAN10Q9H1Z9 355 aaPredicted RBP17.91■□□□□ 0.46
CTSA-217ENST00000607482 MRPL46Q9H2W6 279 aaKnown RBP17.91■□□□□ 0.46
CTSA-217ENST00000607482 RPF2Q9H7B2 306 aaKnown RBP17.91■□□□□ 0.46
CTSA-217ENST00000607482 KCMF1Q9P0J7 381 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 VTI1BQ9UEU0 232 aa17.91■□□□□ 0.46
CTSA-217ENST00000607482 NPIPA1Q9UND3 350 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms