RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 CCDC91Q7Z6B0 441 aa9.95□□□□□ -0.82
TUBE1-210ENST00000604967 RPS19BP1Q86WX3 136 aaKnown RBP9.95□□□□□ -0.82
TUBE1-210ENST00000604967 CHERPQ8IWX8 916 aaKnown RBP9.95□□□□□ -0.82
TUBE1-210ENST00000604967 IFT20Q8IY31 132 aa9.95□□□□□ -0.82
TUBE1-210ENST00000604967 MMP21Q8N119 569 aa9.95□□□□□ -0.82
TUBE1-210ENST00000604967 ST6GALNAC3Q8NDV1 305 aa9.95□□□□□ -0.82
TUBE1-210ENST00000604967 ZNF483Q8TF39 744 aaPredicted RBP9.95□□□□□ -0.82
TUBE1-210ENST00000604967 THAP3Q8WTV1 239 aaPredicted RBP9.95□□□□□ -0.82
TUBE1-210ENST00000604967 NCLNQ969V3 563 aa9.95□□□□□ -0.82
TUBE1-210ENST00000604967 MTFMTQ96DP5 389 aaKnown RBP9.95□□□□□ -0.82
TUBE1-210ENST00000604967 SCMH1Q96GD3 660 aa9.95□□□□□ -0.82
TUBE1-210ENST00000604967 FAR2Q96K12 515 aa9.95□□□□□ -0.82
TUBE1-210ENST00000604967 KCNC2Q96PR1 638 aa9.95□□□□□ -0.82
TUBE1-210ENST00000604967 TBCDQ9BTW9 1192 aa9.95□□□□□ -0.82
TUBE1-210ENST00000604967 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.95□□□□□ -0.82
TUBE1-210ENST00000604967 ACTR8Q9H981 624 aa9.95□□□□□ -0.82
TUBE1-210ENST00000604967 LYRM4Q9HD34 91 aa9.95□□□□□ -0.82
TUBE1-210ENST00000604967 FBXW2Q9UKT8 454 aa9.95□□□□□ -0.82
TUBE1-210ENST00000604967 SVILO95425 2214 aa9.95□□□□□ -0.82
TUBE1-210ENST00000604967 TRBV11-1A0A0K0K1C0 115 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 CCDC189A1A4V9 331 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 DYTNA2CJ06 578 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 GLOD5A6NK44 160 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 STX16-NPEPL1H3BU86 382 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 PSMD12O00232 456 aaPredicted RBP9.94□□□□□ -0.82
TUBE1-210ENST00000604967 STX16O14662 325 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 CTNSO60931 367 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 KRT38O76015 456 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 CLDN1O95832 211 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 LDLRP01130 860 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 CLPSP04118 112 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 SNRPAP09012 282 aaKnown RBP9.94□□□□□ -0.82
TUBE1-210ENST00000604967 SOX18P35713 384 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 PIK3CBP42338 1070 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 IGLV3-21P80748 117 aaPredicted RBP9.94□□□□□ -0.82
TUBE1-210ENST00000604967 SLAMF1Q13291 335 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 TMEM35AQ53FP2 167 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 ZNF766Q5HY98 468 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 PAGE2BQ5JRK9 111 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 OR4C11Q6IEV9 310 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 NIPAL1Q6NVV3 410 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 CEP128Q6ZU80 1094 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 MDGA2Q7Z553 956 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 MYLK4Q86YV6 388 aaPredicted RBP9.94□□□□□ -0.82
TUBE1-210ENST00000604967 SIAH3Q8IW03 269 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 ZNF595Q8IYB9 648 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 B3GNT7Q8NFL0 401 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 NR4A3Q92570 626 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 CMTM7Q96FZ5 175 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 ZNF354BQ96LW1 612 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 MRPL57Q9BQC6 102 aaKnown RBP9.94□□□□□ -0.82
TUBE1-210ENST00000604967 C1QTNF3Q9BXJ4 246 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 TSPYL1Q9H0U9 437 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 TRIM45Q9H8W5 580 aaPredicted RBP9.94□□□□□ -0.82
TUBE1-210ENST00000604967 TNFRSF12AQ9NP84 129 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 SEMA4BQ9NPR2 832 aaPredicted RBP9.94□□□□□ -0.82
TUBE1-210ENST00000604967 KLHL1Q9NR64 748 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 VTI1BQ9UEU0 232 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 CELSR2Q9HCU4 2923 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 UNC79Q9P2D8 2635 aa9.94□□□□□ -0.82
TUBE1-210ENST00000604967 SPTBN1Q01082 2364 aaKnown RBP9.93□□□□□ -0.82
TUBE1-210ENST00000604967 A0A0G2JMM0 328 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 A0A1W2PPB8 328 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 A0A1W2PRS3 328 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 ASPDHA6ND91 283 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 KIR3DP1A8MWS1 328 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 G3V2L1 256 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 UBFD1O14562 309 aaKnown RBP9.93□□□□□ -0.82
TUBE1-210ENST00000604967 PGRMC2O15173 223 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 PROM1O43490 865 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 CLDN9O95484 217 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 RBP1P09455 135 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 PYGBP11216 843 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 COL6A2P12110 1019 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 CHN1P15882 459 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 COL8A1P27658 744 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 TRHRP34981 398 aaPredicted RBP9.93□□□□□ -0.82
TUBE1-210ENST00000604967 SSR2P43308 183 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 SKP1P63208 163 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 SLC13A2Q13183 592 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 TERF2Q15554 542 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 HIST2H2ACQ16777 129 aaPredicted RBP9.93□□□□□ -0.82
TUBE1-210ENST00000604967 MEP1AQ16819 746 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 ZNF750Q32MQ0 723 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 SGO1Q5FBB7 561 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 FHL5Q5TD97 284 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 CRYBG3Q68DQ2 2970 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 HIST2H2AA3Q6FI13 130 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 KLC3Q6P597 504 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 FGD2Q7Z6J4 655 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 ZCCHC7Q8N3Z6 543 aaKnown RBP9.93□□□□□ -0.82
TUBE1-210ENST00000604967 OR4F6Q8NGB9 312 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 ZNF721Q8TF20 911 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 UBE2E3Q969T4 207 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 PPWD1Q96BP3 646 aaKnown RBP9.93□□□□□ -0.82
TUBE1-210ENST00000604967 SCYL1Q96KG9 808 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 FRMD6Q96NE9 622 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 TMEM237Q96Q45 408 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 HBEGFQ99075 208 aa9.93□□□□□ -0.82
TUBE1-210ENST00000604967 NTMT1Q9BV86 223 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms