RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 CSF3RQ99062 836 aa16.52■□□□□ 0.23
DDX49-213ENST00000602113 PHOX2BQ99453 314 aa16.52■□□□□ 0.23
DDX49-213ENST00000602113 SLC6A13Q9NSD5 602 aa16.52■□□□□ 0.23
DDX49-213ENST00000602113 CUTCQ9NTM9 273 aa16.52■□□□□ 0.23
DDX49-213ENST00000602113 ATAD3AQ9NVI7 634 aa16.52■□□□□ 0.23
DDX49-213ENST00000602113 GID8Q9NWU2 228 aa16.52■□□□□ 0.23
DDX49-213ENST00000602113 PHF11Q9UIL8 331 aa16.52■□□□□ 0.23
DDX49-213ENST00000602113 SERTAD3Q9UJW9 196 aa16.52■□□□□ 0.23
DDX49-213ENST00000602113 CROTQ9UKG9 612 aa16.52■□□□□ 0.23
DDX49-213ENST00000602113 NEUROG3Q9Y4Z2 214 aa16.52■□□□□ 0.23
DDX49-213ENST00000602113 SPTBP11277 2137 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 PRSS51A0A1B0GVH4 220 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 NQO1P15559 274 aaKnown RBP16.51■□□□□ 0.23
DDX49-213ENST00000602113 PTPN6P29350 595 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 PGM1P36871 562 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 CDKN2CP42773 168 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 TNFRSF17Q02223 184 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 ACY1Q03154 408 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 TRA2AQ13595 282 aaKnown RBP eCLIP16.51■□□□□ 0.23
DDX49-213ENST00000602113 C6orf10Q5SRN2 563 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 ANXA8L1Q5VT79 327 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 MSRB3Q8IXL7 192 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 GPR135Q8IZ08 494 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 EXOSC8Q96B26 276 aaKnown RBP16.51■□□□□ 0.23
DDX49-213ENST00000602113 CLPTM1LQ96KA5 538 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 OR6C1Q96RD1 312 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 THTPAQ9BU02 230 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 NPLQ9BXD5 320 aaPredicted RBP16.51■□□□□ 0.23
DDX49-213ENST00000602113 PAIP1Q9H074 479 aaKnown RBP16.51■□□□□ 0.23
DDX49-213ENST00000602113 RMND5AQ9H871 391 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 FANCEQ9HB96 536 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 NDE1Q9NXR1 346 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 TAS2R7Q9NYW3 318 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 EHD3Q9NZN3 535 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 CES1P1Q9UKY3 287 aa16.51■□□□□ 0.23
DDX49-213ENST00000602113 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.51■□□□□ 0.23
DDX49-213ENST00000602113 COL27A1Q8IZC6 1860 aaPredicted RBP16.51■□□□□ 0.23
DDX49-213ENST00000602113 C1orf226A1L170 272 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 ZNF749O43361 778 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 CHST10O43529 356 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 FOXD2O60548 495 aaPredicted RBP16.5■□□□□ 0.23
DDX49-213ENST00000602113 KCNH1O95259 989 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 NSA2O95478 260 aaKnown RBP16.5■□□□□ 0.23
DDX49-213ENST00000602113 NR2F6P10588 404 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 HOXB9P17482 250 aaPredicted RBP16.5■□□□□ 0.23
DDX49-213ENST00000602113 CPN2P22792 545 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 FAM214AQ32MH5 1076 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 GTDC1Q4AE62 458 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 TLDC1Q6P9B6 456 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 DNAJC14Q6Y2X3 702 aaPredicted RBP16.5■□□□□ 0.23
DDX49-213ENST00000602113 KIAA2013Q8IYS2 634 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 METTL27Q8N6F8 245 aaPredicted RBP16.5■□□□□ 0.23
DDX49-213ENST00000602113 CCDC115Q96NT0 180 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 TRIM8Q9BZR9 551 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 SLAMF7Q9NQ25 335 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 OCIAD1Q9NX40 245 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 TOR4AQ9NXH8 423 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 SLC25A37Q9NYZ2 338 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 BTNL2Q9UIR0 455 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 TMEM184BQ9Y519 407 aaPredicted RBP16.5■□□□□ 0.23
DDX49-213ENST00000602113 A0A096LPI6 279 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 TRBV5-3A0A0A0MS03 114 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 CFAP73A6NFT4 308 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 DLL1O00548 723 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 RNASET2O00584 256 aaKnown RBP16.5■□□□□ 0.23
DDX49-213ENST00000602113 CYR61O00622 381 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 RFPL3O75679 317 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 NPPAP01160 153 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 GSNP06396 782 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 SLC6A2P23975 617 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 ILKQ13418 452 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 LRIF1Q5T3J3 769 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 SLC48A1Q6P1K1 146 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 BNC2Q6ZN30 1099 aaPredicted RBP16.5■□□□□ 0.23
DDX49-213ENST00000602113 RBM44Q6ZP01 1051 aaKnown RBP16.5■□□□□ 0.23
DDX49-213ENST00000602113 TTLL10Q6ZVT0 673 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 MCUR1Q96AQ8 359 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 CDRT15Q96T59 188 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 HOPXQ9BPY8 73 aaPredicted RBP16.5■□□□□ 0.23
DDX49-213ENST00000602113 MS4A12Q9NXJ0 267 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 VAPAQ9P0L0 249 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 HCN3Q9P1Z3 774 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 DHCR7Q9UBM7 475 aaKnown RBP16.5■□□□□ 0.23
DDX49-213ENST00000602113 UTS2RQ9UKP6 389 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 PACSIN3Q9UKS6 424 aa16.5■□□□□ 0.23
DDX49-213ENST00000602113 FAM227AF5H4B4 570 aa16.49■□□□□ 0.23
DDX49-213ENST00000602113 RFXANKO14593 260 aa16.49■□□□□ 0.23
DDX49-213ENST00000602113 ERN1O75460 977 aaKnown RBP16.49■□□□□ 0.23
DDX49-213ENST00000602113 CPSF4O95639 269 aaKnown RBP16.49■□□□□ 0.23
DDX49-213ENST00000602113 CSTF2P33240 577 aaKnown RBP eCLIP16.49■□□□□ 0.23
DDX49-213ENST00000602113 BUD31P41223 144 aaPredicted RBP16.49■□□□□ 0.23
DDX49-213ENST00000602113 TRPC1P48995 793 aa16.49■□□□□ 0.23
DDX49-213ENST00000602113 HNRNPFP52597 415 aaKnown RBP16.49■□□□□ 0.23
DDX49-213ENST00000602113 PCBP4P57723 403 aaKnown RBP16.49■□□□□ 0.23
DDX49-213ENST00000602113 SIM1P81133 766 aaPredicted RBP16.49■□□□□ 0.23
DDX49-213ENST00000602113 SHC2P98077 582 aa16.49■□□□□ 0.23
DDX49-213ENST00000602113 MAT1AQ00266 395 aaKnown RBP16.49■□□□□ 0.23
DDX49-213ENST00000602113 E2F1Q01094 437 aa16.49■□□□□ 0.23
DDX49-213ENST00000602113 INSM1Q01101 510 aaPredicted RBP16.49■□□□□ 0.23
DDX49-213ENST00000602113 FOXM1Q08050 763 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms