RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 MPEG1Q2M385 716 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 GTDC1Q4AE62 458 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 DBX2Q6ZNG2 339 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 MSRB3Q8IXL7 192 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 TRIML2Q8N7C3 387 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 FAM156AQ8NDB6 213 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 OR4D9Q8NGE8 314 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 KLHL6Q8WZ60 621 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 STMN2Q93045 179 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 ZBED6CLQ96FA7 236 aaPredicted RBP17.04■□□□□ 0.32
VRK3-225ENST00000601912 PHF12Q96QT6 1004 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 KCTD14Q9BQ13 255 aaPredicted RBP17.04■□□□□ 0.32
VRK3-225ENST00000601912 NPLQ9BXD5 320 aaPredicted RBP17.04■□□□□ 0.32
VRK3-225ENST00000601912 ZNF768Q9H5H4 540 aaKnown RBP17.04■□□□□ 0.32
VRK3-225ENST00000601912 SYNDIG1Q9H7V2 258 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 SLC6A13Q9NSD5 602 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 ZNF282Q9UDV7 671 aaPredicted RBP17.04■□□□□ 0.32
VRK3-225ENST00000601912 UTS2RQ9UKP6 389 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 PSME2Q9UL46 239 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 ATXN7L1Q9ULK2 861 aaPredicted RBP17.04■□□□□ 0.32
VRK3-225ENST00000601912 DAPP1Q9UN19 280 aa17.04■□□□□ 0.32
VRK3-225ENST00000601912 A0A1W2PQM1 296 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 HYKKA2RU49 373 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 FLRT2O43155 660 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 ENTPD5O75356 428 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 LDOC1O95751 146 aaPredicted RBP17.03■□□□□ 0.32
VRK3-225ENST00000601912 C6orf47O95873 294 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 ABCB1P08183 1280 aaPredicted RBP17.03■□□□□ 0.32
VRK3-225ENST00000601912 ZNF806P0C7X5 589 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 NELFEP18615 380 aaKnown RBP17.03■□□□□ 0.32
VRK3-225ENST00000601912 MSX2P35548 267 aaPredicted RBP17.03■□□□□ 0.32
VRK3-225ENST00000601912 LIM2P55344 173 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 TRAP1Q12931 704 aaKnown RBP17.03■□□□□ 0.32
VRK3-225ENST00000601912 BNIP2Q12982 314 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 RUNX2Q13950 521 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 FAM53BQ14153 422 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 FLOT2Q14254 428 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 GRM7Q14831 915 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 C18orf63Q68DL7 685 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 PRR23CQ6ZRP0 262 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 TTC29Q8NA56 475 aaPredicted RBP17.03■□□□□ 0.32
VRK3-225ENST00000601912 GOT1L1Q8NHS2 421 aaPredicted RBP17.03■□□□□ 0.32
VRK3-225ENST00000601912 PRRX2Q99811 253 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 SLC35C2Q9NQQ7 365 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 GIMAP4Q9NUV9 329 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 TAS2R9Q9NYW1 312 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 NEUROG3Q9Y4Z2 214 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 ZNF318Q5VUA4 2279 aa17.03■□□□□ 0.32
VRK3-225ENST00000601912 CTSBP07858 339 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 MSL3P1P0C860 447 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 HOXB9P17482 250 aaPredicted RBP17.02■□□□□ 0.32
VRK3-225ENST00000601912 PPIBP23284 216 aaKnown RBP17.02■□□□□ 0.32
VRK3-225ENST00000601912 NTSP30990 170 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 GSK3BP49841 420 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 EMP3P54852 163 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 MANFP55145 182 aaKnown RBP17.02■□□□□ 0.32
VRK3-225ENST00000601912 SNRPNP63162 240 aaKnown RBP17.02■□□□□ 0.32
VRK3-225ENST00000601912 HBA1P69905 142 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 TNFRSF17Q02223 184 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 KCNAB1Q14722 419 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 PRSS53Q2L4Q9 553 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 FBXW10Q5XX13 1052 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 SLC48A1Q6P1K1 146 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 IFNEQ86WN2 208 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 ARHGEF39Q8N4T4 335 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 RHBDD1Q8TEB9 315 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 OR5P2Q8WZ92 322 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 JADE3Q92613 823 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 CNDP2Q96KP4 475 aaKnown RBP17.02■□□□□ 0.32
VRK3-225ENST00000601912 CPPED1Q9BRF8 314 aaPredicted RBP17.02■□□□□ 0.32
VRK3-225ENST00000601912 FANCEQ9HB96 536 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 PRDM9Q9NQV7 894 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 ACSS1Q9NUB1 689 aaPredicted RBP17.02■□□□□ 0.32
VRK3-225ENST00000601912 KCMF1Q9P0J7 381 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 C5AR2Q9P296 337 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 VPS13AQ96RL7 3174 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 SCN3AQ9NY46 2000 aa17.02■□□□□ 0.32
VRK3-225ENST00000601912 FITM1A5D6W6 292 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 ZNF860A6NHJ4 632 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 GLOD5A6NK44 160 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 TMEM150CB9EJG8 249 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 CLIC1O00299 241 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 PGRMC2O15173 223 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 BCAS2O75934 225 aaPredicted RBP17.01■□□□□ 0.31
VRK3-225ENST00000601912 OR2B3O76000 313 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 ANKRD34CP0C6C1 535 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 CKMT2P17540 419 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 PCBP4P57723 403 aaKnown RBP17.01■□□□□ 0.31
VRK3-225ENST00000601912 MS4A2Q01362 244 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 SLC14A1Q13336 389 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 SELPLGQ14242 412 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 FAM214AQ32MH5 1076 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 PRSS41Q7RTY9 318 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 PDSS2Q86YH6 399 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 GPR135Q8IZ08 494 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 TNIP2Q8NFZ5 429 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 ZFP28Q8NHY6 868 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 AURKBQ96GD4 344 aaPredicted RBP17.01■□□□□ 0.31
VRK3-225ENST00000601912 BBS4Q96RK4 519 aa17.01■□□□□ 0.31
VRK3-225ENST00000601912 NEUROD4Q9HD90 331 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms