RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 DEFB134Q4QY38 66 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 SLC9B1Q4ZJI4 515 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 RFTN2Q52LD8 501 aaPredicted RBP11□□□□□ -0.65
CHMP2A-207ENST00000600804 SPDYAQ5MJ70 313 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 PRAMEF17Q5VTA0 474 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 METTL21CQ5VZV1 264 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 NOXRED1Q6NXP6 359 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 ACAD11Q709F0 780 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 SPATA19Q7Z5L4 167 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 FAM9CQ8IZT9 166 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 C1orf52Q8N6N3 182 aaKnown RBP11□□□□□ -0.65
CHMP2A-207ENST00000600804 AMER3Q8N944 861 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 OR9A4Q8NGU2 314 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 PUM2Q8TB72 1066 aaKnown RBP eCLIP11□□□□□ -0.65
CHMP2A-207ENST00000600804 ZCCHC10Q8TBK6 192 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 FKBP10Q96AY3 582 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 ZNF764Q96H86 408 aaPredicted RBP11□□□□□ -0.65
CHMP2A-207ENST00000600804 ARHGAP9Q9BRR9 750 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 ULBP3Q9BZM4 244 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 SLC7A5P2Q9GIP4 190 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 TGIF2Q9GZN2 237 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 SLC26A1Q9H2B4 701 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 COPS7BQ9H9Q2 264 aaPredicted RBP11□□□□□ -0.65
CHMP2A-207ENST00000600804 ZNF304Q9HCX3 659 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 NPHS2Q9NP85 383 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 TCF7L2Q9NQB0 619 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 MRGBPQ9NV56 204 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 MS4A12Q9NXJ0 267 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 DHCR7Q9UBM7 475 aaKnown RBP11□□□□□ -0.65
CHMP2A-207ENST00000600804 DAPP1Q9UN19 280 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 MAP4K5Q9Y4K4 846 aa11□□□□□ -0.65
CHMP2A-207ENST00000600804 A0A0A6YYC8 382 aaPredicted RBP10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 ATP6AP2A0A1C7CYW4 349 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 CLEC18AA5D8T8 446 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 STMND1H3BQB6 276 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 I3L1I5 382 aaPredicted RBP10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 SAP18O00422 153 aaKnown RBP10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 RTCAO00442 366 aaKnown RBP10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 PCDH7O60245 1069 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 SNX3O60493 162 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 DIAPH2O60879 1101 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 GUCY1B2O75343 617 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 EEDO75530 441 aaKnown RBP10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 ATP6AP2O75787 350 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 FAM107AO95990 144 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 NTRK1P04629 796 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 KLK1P06870 262 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 KLK3P07288 261 aaPredicted RBP10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 BCKDHAP12694 445 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 ZNF28P17035 718 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 AGXTP21549 392 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 ALAS2P22557 587 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 CERS1P27544 350 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 LIM2P55344 173 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 LSM12Q3MHD2 195 aaKnown RBP10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 CCNYL2Q5T2Q4 361 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 VWA5B1Q5TIE3 1220 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 C6orf15Q6UXA7 325 aaPredicted RBP10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 CLEC18BQ6UXF7 455 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 IKBIPQ70UQ0 350 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 PRSS41Q7RTY9 318 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 PIGWQ7Z7B1 504 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 PTRH1Q86Y79 214 aaKnown RBP10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 ESX1Q8N693 406 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 FNDC5Q8NAU1 212 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 CLEC18CQ8NCF0 446 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 C7orf57Q8NEG2 295 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 C10orf82Q8WW14 230 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 CLIP3Q96DZ5 547 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 MMABQ96EY8 250 aaPredicted RBP10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 OR1F2PQ96R84 312 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 OR52B2Q96RD2 323 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 BRINP2Q9C0B6 783 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 WDR55Q9H6Y2 383 aaPredicted RBP10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 WDR54Q9H977 334 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 MYNNQ9NPC7 610 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 MKKSQ9NPJ1 570 aaPredicted RBP10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 SLC22A11Q9NSA0 550 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 TMEM45AQ9NWC5 275 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 NOP53Q9NZM5 478 aaKnown RBP10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 KCMF1Q9P0J7 381 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 PHF11Q9UIL8 331 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 MAPRE3Q9UPY8 281 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 EIF3LQ9Y262 564 aaKnown RBP10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 ASB4Q9Y574 426 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 NUP210LQ5VU65 1888 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 SCN2AQ99250 2005 aa10.99□□□□□ -0.65
CHMP2A-207ENST00000600804 NUP214P35658 2090 aaPredicted RBP10.98□□□□□ -0.65
CHMP2A-207ENST00000600804 ARHGAP10A1A4S6 786 aa10.98□□□□□ -0.65
CHMP2A-207ENST00000600804 SYNDIG1LA6NDD5 238 aa10.98□□□□□ -0.65
CHMP2A-207ENST00000600804 SGK494L7N484 410 aa10.98□□□□□ -0.65
CHMP2A-207ENST00000600804 CHST10O43529 356 aa10.98□□□□□ -0.65
CHMP2A-207ENST00000600804 TMPRSS11DO60235 418 aa10.98□□□□□ -0.65
CHMP2A-207ENST00000600804 PRMT3O60678 531 aa10.98□□□□□ -0.65
CHMP2A-207ENST00000600804 TBX19O60806 448 aa10.98□□□□□ -0.65
CHMP2A-207ENST00000600804 PEX11AO75192 247 aa10.98□□□□□ -0.65
CHMP2A-207ENST00000600804 SH3BGRLO75368 114 aa10.98□□□□□ -0.65
CHMP2A-207ENST00000600804 RDH16O75452 317 aa10.98□□□□□ -0.65
CHMP2A-207ENST00000600804 ANXA4P09525 319 aaPredicted RBP10.98□□□□□ -0.65
CHMP2A-207ENST00000600804 RAB40ALP0C0E4 278 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms