RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 ATG4BQ9Y4P1 393 aa14.74□□□□□ -0.05
RPS28-203ENST00000600659 ASB4Q9Y574 426 aa14.74□□□□□ -0.05
RPS28-203ENST00000600659 COPEO14579 308 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 CTNSO60931 367 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 ICAM2P13598 275 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 CREB1P16220 341 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 ARL1P40616 181 aaPredicted RBP14.73□□□□□ -0.05
RPS28-203ENST00000600659 CCT5P48643 541 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 FOXA1P55317 472 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 DNAJB13P59910 316 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 PHEXP78562 749 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 IGLV3-21P80748 117 aaPredicted RBP14.73□□□□□ -0.05
RPS28-203ENST00000600659 FOXK1P85037 733 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 ZNF844Q08AG5 666 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 TBL3Q12788 808 aaKnown RBP14.73□□□□□ -0.05
RPS28-203ENST00000600659 LCP2Q13094 533 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 SLAMF1Q13291 335 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 PCLAFQ15004 111 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 EXT1Q16394 746 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 C10orf62Q5T681 223 aaPredicted RBP14.73□□□□□ -0.05
RPS28-203ENST00000600659 C18orf63Q68DL7 685 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 CLNKQ7Z7G1 428 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 UCN3Q969E3 161 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 HBEGFQ99075 208 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 MRPL1Q9BYD6 325 aaKnown RBP14.73□□□□□ -0.05
RPS28-203ENST00000600659 OXSMQ9NWU1 459 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 FBXW2Q9UKT8 454 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 PCDHGA10Q9Y5H3 936 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 MYO18BQ8IUG5 2567 aa14.73□□□□□ -0.05
RPS28-203ENST00000600659 PRRC2CQ9Y520 2896 aaKnown RBP14.73□□□□□ -0.05
RPS28-203ENST00000600659 WASHC1A8K0Z3 465 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 FGF17O60258 216 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 LDB3O75112 727 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 MYL2P10916 166 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 CHN1P15882 459 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 TPP2P29144 1249 aaPredicted RBP14.72□□□□□ -0.05
RPS28-203ENST00000600659 RAP1GDS1P52306 607 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 TNFRSF17Q02223 184 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 GALNT1Q10472 559 aaPredicted RBP14.72□□□□□ -0.05
RPS28-203ENST00000600659 SLC13A2Q13183 592 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 TERF2Q15554 542 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 IGFBP7Q16270 282 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 IRAK1BP1Q5VVH5 260 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 FCRLBQ6BAA4 426 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 FRMD7Q6ZUT3 714 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 GPRIN3Q6ZVF9 776 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 SRRM1Q8IYB3 904 aaKnown RBP14.72□□□□□ -0.05
RPS28-203ENST00000600659 METTL4Q8N3J2 472 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 ZADH2Q8N4Q0 377 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 CDYL2Q8N8U2 506 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 CATSPER1Q8NEC5 780 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 RDH11Q8TC12 318 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 TM9SF4Q92544 642 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 KCNA7Q96RP8 456 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 SERPINI1Q99574 410 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 SLC29A3Q9BZD2 475 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 ELOVL6Q9H5J4 265 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 EPS8L2Q9H6S3 715 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 PLA2G3Q9NZ20 509 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 MRPS33Q9Y291 106 aaKnown RBP14.72□□□□□ -0.05
RPS28-203ENST00000600659 NTNG1Q9Y2I2 539 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 PLLPQ9Y342 182 aa14.72□□□□□ -0.05
RPS28-203ENST00000600659 RP1L1Q8IWN7 2480 aaPredicted RBP14.72□□□□□ -0.05
RPS28-203ENST00000600659 MYOCOSA0A1B0GUC4 107 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 A0A1W2PR48 441 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 A8MUA0 341 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 MANBAO00462 879 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 CLDN4O14493 209 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 PROM1O43490 865 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 ESRRBO95718 433 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 MLYCDO95822 493 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 WDPCPO95876 746 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 GBAP04062 536 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 CPN2P22792 545 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 DEKP35659 375 aaKnown RBP14.71□□□□□ -0.05
RPS28-203ENST00000600659 ID2Q02363 134 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 ACTN3Q08043 901 aaPredicted RBP14.71□□□□□ -0.05
RPS28-203ENST00000600659 IFFO1Q0D2I5 559 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 IFT88Q13099 833 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 TNFAIP8L3Q5GJ75 292 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 NUDT13Q86X67 352 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 CRLF3Q8IUI8 442 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 IQCKQ8N0W5 287 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 ARMC10Q8N2F6 343 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 EFCAB3Q8N7B9 438 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 SELENOMQ8WWX9 145 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 HAS2Q92819 552 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 CCDC126Q96EE4 140 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 MAGEB10Q96LZ2 347 aaPredicted RBP14.71□□□□□ -0.05
RPS28-203ENST00000600659 CENPKQ9BS16 269 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 RNF32Q9H0A6 362 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 BRF2Q9HAW0 419 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 ADAP2Q9NPF8 381 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 TEX10Q9NXF1 929 aaPredicted RBP14.71□□□□□ -0.05
RPS28-203ENST00000600659 SLC17A7Q9P2U7 560 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 VTI1BQ9UEU0 232 aa14.71□□□□□ -0.05
RPS28-203ENST00000600659 SVILO95425 2214 aa14.71□□□□□ -0.06
RPS28-203ENST00000600659 TYROBPO43914 113 aa14.7□□□□□ -0.06
RPS28-203ENST00000600659 PRKNO60260 465 aaPredicted RBP14.7□□□□□ -0.06
RPS28-203ENST00000600659 SPAG7O75391 227 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms