RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 HIST1H1TP22492 207 aaPredicted RBP14.72□□□□□ -0.05
VRK3-221ENST00000600284 GMPRP36959 345 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 PIK3CBP42338 1070 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 SSR4P51571 173 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 BMPR2Q13873 1038 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 AP5B1Q2VPB7 878 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 DEPDC1Q5TB30 811 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 MROH9Q5TGP6 573 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 KHDRBS2Q5VWX1 349 aaKnown RBP14.72□□□□□ -0.05
VRK3-221ENST00000600284 LIPJQ5W064 366 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 METTL2BQ6P1Q9 378 aaKnown RBP14.72□□□□□ -0.05
VRK3-221ENST00000600284 KLC3Q6P597 504 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 XKRXQ6PP77 449 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 ZNF793Q6ZN11 406 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 MRGPRGQ86SM5 289 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 OR8K3Q8NH51 312 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 OR14A16Q8NHC5 309 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 KCTD4Q8WVF5 259 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 CSF3RQ99062 836 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 CENPKQ9BS16 269 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 SNX15Q9NRS6 342 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 MS4A12Q9NXJ0 267 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 PCDHGA11Q9Y5H2 935 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 MYO7BQ6PIF6 2116 aa14.72□□□□□ -0.05
VRK3-221ENST00000600284 TEX15Q9BXT5 2789 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 HMX2A2RU54 273 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 PRSS44E7EML9 344 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 KLK8O60259 260 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 UGDHO60701 494 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 TGFB1P01137 390 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 ESRRAP11474 423 aaPredicted RBP14.71□□□□□ -0.05
VRK3-221ENST00000600284 PCNAP12004 261 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 PPP2R1BP30154 601 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 ALDH18A1P54886 795 aaKnown RBP14.71□□□□□ -0.05
VRK3-221ENST00000600284 SETDB1Q15047 1291 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 PCBP2Q15366 365 aaKnown RBP eCLIP14.71□□□□□ -0.05
VRK3-221ENST00000600284 C3AR1Q16581 482 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 WHAMMP3Q1A5X7 153 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 OR4C11Q6IEV9 310 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 HSDL2Q6YN16 418 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 CLNKQ7Z7G1 428 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 TICAM1Q8IUC6 712 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 SULF2Q8IWU5 870 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 CYP4Z2PQ8N1L4 340 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 CPSF7Q8N684 471 aaKnown RBP14.71□□□□□ -0.05
VRK3-221ENST00000600284 TEX9Q8N6V9 391 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 C16orf52Q8NHV5 167 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 PTPMT1Q8WUK0 201 aaPredicted RBP14.71□□□□□ -0.05
VRK3-221ENST00000600284 RGMAQ96B86 450 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 MAPKAP1Q9BPZ7 522 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 FUT8Q9BYC5 575 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 ACSS3Q9H6R3 686 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 RUBCNLQ9H714 662 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 TIMMDC1Q9NPL8 285 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 PSD3Q9NYI0 1048 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 MYOTQ9UBF9 498 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 MTRF1LQ9UGC7 380 aaKnown RBP14.71□□□□□ -0.05
VRK3-221ENST00000600284 ANGPTL3Q9Y5C1 460 aa14.71□□□□□ -0.05
VRK3-221ENST00000600284 TNPO3Q9Y5L0 923 aaKnown RBP14.71□□□□□ -0.05
VRK3-221ENST00000600284 A0A096LPK6 155 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 TMEM200CA6NKL6 621 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 PEX1O43933 1283 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 GFAPP14136 432 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 CPN2P22792 545 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 TYK2P29597 1187 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 SSR2P43308 183 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 PIK3CGP48736 1102 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 MEOX1P50221 254 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 SERPINB8P50452 374 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 SMSP52788 366 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 IRF9Q00978 393 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 PFKFB4Q16877 469 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 RNFT1Q5M7Z0 435 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 EID3Q8N140 333 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 MMGT1Q8N4V1 131 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 ZFP62Q8NB50 900 aaPredicted RBP14.7□□□□□ -0.06
VRK3-221ENST00000600284 OR5L2Q8NGL0 311 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 HUS1BQ8NHY5 278 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 REPS1Q96D71 796 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 TSPAN10Q9H1Z9 355 aaPredicted RBP14.7□□□□□ -0.06
VRK3-221ENST00000600284 PRM3Q9NNZ6 103 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 CHST11Q9NPF2 352 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 SH3BGRL2Q9UJC5 107 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 CACNA1DQ01668 2161 aa14.7□□□□□ -0.06
VRK3-221ENST00000600284 A8MVJ9 347 aa14.69□□□□□ -0.06
VRK3-221ENST00000600284 H0YIV9 168 aa14.69□□□□□ -0.06
VRK3-221ENST00000600284 RTCAO00442 366 aaKnown RBP14.69□□□□□ -0.06
VRK3-221ENST00000600284 PRKNO60260 465 aaPredicted RBP14.69□□□□□ -0.06
VRK3-221ENST00000600284 LDB3O75112 727 aa14.69□□□□□ -0.06
VRK3-221ENST00000600284 URI1O94763 535 aaPredicted RBP14.69□□□□□ -0.06
VRK3-221ENST00000600284 ALDOAP04075 364 aaKnown RBP14.69□□□□□ -0.06
VRK3-221ENST00000600284 ABOP16442 354 aa14.69□□□□□ -0.06
VRK3-221ENST00000600284 TNNI3P19429 210 aa14.69□□□□□ -0.06
VRK3-221ENST00000600284 PTX3P26022 381 aaPredicted RBP14.69□□□□□ -0.06
VRK3-221ENST00000600284 RAP1GDS1P52306 607 aa14.69□□□□□ -0.06
VRK3-221ENST00000600284 PHEXP78562 749 aa14.69□□□□□ -0.06
VRK3-221ENST00000600284 IGLV3-21P80748 117 aaPredicted RBP14.69□□□□□ -0.06
VRK3-221ENST00000600284 MDGA2Q7Z553 956 aa14.69□□□□□ -0.06
VRK3-221ENST00000600284 ZCCHC7Q8N3Z6 543 aaKnown RBP14.69□□□□□ -0.06
VRK3-221ENST00000600284 TANKQ92844 425 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms