RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 PHF12Q96QT6 1004 aa9.12□□□□□ -0.95
VRK3-216ENST00000599342 VKORC1Q9BQB6 163 aa9.12□□□□□ -0.95
VRK3-216ENST00000599342 CENPKQ9BS16 269 aa9.12□□□□□ -0.95
VRK3-216ENST00000599342 TBCDQ9BTW9 1192 aa9.12□□□□□ -0.95
VRK3-216ENST00000599342 ALOXE3Q9BYJ1 711 aa9.12□□□□□ -0.95
VRK3-216ENST00000599342 PRDM7Q9NQW5 492 aa9.12□□□□□ -0.95
VRK3-216ENST00000599342 COQ3Q9NZJ6 369 aa9.12□□□□□ -0.95
VRK3-216ENST00000599342 KCMF1Q9P0J7 381 aa9.12□□□□□ -0.95
VRK3-216ENST00000599342 MYOTQ9UBF9 498 aa9.12□□□□□ -0.95
VRK3-216ENST00000599342 OPTCQ9UBM4 332 aa9.12□□□□□ -0.95
VRK3-216ENST00000599342 COPS7AQ9UBW8 275 aa9.12□□□□□ -0.95
VRK3-216ENST00000599342 ZNF490Q9ULM2 529 aaPredicted RBP9.12□□□□□ -0.95
VRK3-216ENST00000599342 PPT2Q9UMR5 302 aa9.12□□□□□ -0.95
VRK3-216ENST00000599342 CLDN16Q9Y5I7 305 aa9.12□□□□□ -0.95
VRK3-216ENST00000599342 UNC79Q9P2D8 2635 aa9.12□□□□□ -0.95
VRK3-216ENST00000599342 A0A1B0GTH9 108 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 MYOCOSA0A1B0GUC4 107 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 SYCE1LA8MT33 242 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 C17orf105B2RV13 164 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 K7EPI3 171 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 UBXN8O00124 270 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 WWP2O00308 870 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 ZNHIT1O43257 154 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 DYRK3O43781 588 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 PRKNO60260 465 aaPredicted RBP9.11□□□□□ -0.95
VRK3-216ENST00000599342 LDB3O75112 727 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 FAM155BO75949 473 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 TGFB1P01137 390 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 SLC35E2BP0CK96 405 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 COX7A2P14406 83 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 EPB42P16452 691 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 EPORP19235 508 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 HIST1H1TP22492 207 aaPredicted RBP9.11□□□□□ -0.95
VRK3-216ENST00000599342 CPN2P22792 545 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 ATP5A1P25705 553 aaKnown RBP9.11□□□□□ -0.95
VRK3-216ENST00000599342 SSR2P43308 183 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 MAGEA4P43358 317 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 GPR143P51810 404 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 RAP1GDS1P52306 607 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 PHEXP78562 749 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 PLGLB1Q02325 96 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 AP5B1Q2VPB7 878 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 PAOXQ6QHF9 649 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 IL20RBQ6UXL0 311 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 NCCRP1Q6ZVX7 275 aaPredicted RBP9.11□□□□□ -0.95
VRK3-216ENST00000599342 MDGA2Q7Z553 956 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 CCDC91Q7Z6B0 441 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 ISCA2Q86U28 154 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 CD163Q86VB7 1156 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 DOLPP1Q86YN1 238 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 MYLK4Q86YV6 388 aaPredicted RBP9.11□□□□□ -0.95
VRK3-216ENST00000599342 LAS2Q8IYD9 372 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 ACOT4Q8N9L9 421 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 ZFP62Q8NB50 900 aaPredicted RBP9.11□□□□□ -0.95
VRK3-216ENST00000599342 FAM57AQ8TBR7 257 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 FBXO25Q8TCJ0 367 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 FBF1Q8TES7 1133 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 ZNF473Q8WTR7 871 aaKnown RBP9.11□□□□□ -0.95
VRK3-216ENST00000599342 UBTD2Q8WUN7 234 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 SDCCAG3Q96C92 435 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 CMTM7Q96FZ5 175 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 MAPKAP1Q9BPZ7 522 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 MS4A8Q9BY19 250 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 OR8D2Q9GZM6 311 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 LIN28AQ9H9Z2 209 aaKnown RBP9.11□□□□□ -0.95
VRK3-216ENST00000599342 VTI1BQ9UEU0 232 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 ADGRE2Q9UHX3 823 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 ASB1Q9Y576 335 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 ANGPTL3Q9Y5C1 460 aa9.11□□□□□ -0.95
VRK3-216ENST00000599342 MYO7BQ6PIF6 2116 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 A0A087X1B8 175 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 SAP18O00422 153 aaKnown RBP9.1□□□□□ -0.95
VRK3-216ENST00000599342 RTCAO00442 366 aaKnown RBP9.1□□□□□ -0.95
VRK3-216ENST00000599342 SH3BGRLO75368 114 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 OR6B1O95007 311 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 C1QAP02745 245 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 GFAPP14136 432 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 ELAVL4P26378 380 aaKnown RBP9.1□□□□□ -0.95
VRK3-216ENST00000599342 GMPRP36959 345 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 SOX3P41225 446 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 CASP2P42575 452 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 HK2P52789 917 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 DDX39BQ13838 428 aaKnown RBP9.1□□□□□ -0.95
VRK3-216ENST00000599342 E2F2Q14209 437 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 FAM83EQ2M2I3 478 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 CMPK2Q5EBM0 449 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 KHDRBS2Q5VWX1 349 aaKnown RBP9.1□□□□□ -0.95
VRK3-216ENST00000599342 GRHL2Q6ISB3 625 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 ARHGAP11AQ6P4F7 1023 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 KLC3Q6P597 504 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 SYT10Q6XYQ8 523 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 ZNF793Q6ZN11 406 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 C16orf47Q6ZP98 133 aaPredicted RBP9.1□□□□□ -0.95
VRK3-216ENST00000599342 GK5Q6ZS86 529 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 FGD2Q7Z6J4 655 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 UBE3DQ7Z6J8 389 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 SLC22A16Q86VW1 577 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 CHERPQ8IWX8 916 aaKnown RBP9.1□□□□□ -0.95
VRK3-216ENST00000599342 TEX9Q8N6V9 391 aa9.1□□□□□ -0.95
VRK3-216ENST00000599342 OR2M7Q8NG81 312 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms