RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 TRIM49D1C9J1S8 452 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 CDK2AP1O14519 115 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 CTIFO43310 598 aaKnown RBP14.13□□□□□ -0.15
TGFB1-202ENST00000597453 CLEC3AO75596 197 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 S100BP04271 92 aaPredicted RBP14.13□□□□□ -0.15
TGFB1-202ENST00000597453 SNRPAP09012 282 aaKnown RBP14.13□□□□□ -0.15
TGFB1-202ENST00000597453 ESRRAP11474 423 aaPredicted RBP14.13□□□□□ -0.15
TGFB1-202ENST00000597453 CD22P20273 847 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 RFC3P40938 356 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 KCNC1P48547 511 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 HSPA7P48741 367 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 CLCN2P51788 898 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 PLA2G16P53816 162 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 RAB38P57729 211 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 TERF2Q15554 542 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 ADPRMQ3LIE5 342 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 WDR93Q6P2C0 686 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 KLC3Q6P597 504 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 TTLQ8NG68 377 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 GPR78Q96P69 363 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 CSF3RQ99062 836 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 NPLQ9BXD5 320 aaPredicted RBP14.13□□□□□ -0.15
TGFB1-202ENST00000597453 NT5DC2Q9H857 520 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 PRTFDC1Q9NRG1 225 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 PNO1Q9NRX1 252 aaKnown RBP14.13□□□□□ -0.15
TGFB1-202ENST00000597453 DNAJC11Q9NVH1 559 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 GPRC5BQ9NZH0 403 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 PTBP2Q9UKA9 531 aaKnown RBP14.13□□□□□ -0.15
TGFB1-202ENST00000597453 ZNF490Q9ULM2 529 aaPredicted RBP14.13□□□□□ -0.15
TGFB1-202ENST00000597453 PPIEQ9UNP9 301 aaKnown RBP14.13□□□□□ -0.15
TGFB1-202ENST00000597453 MEMO1Q9Y316 297 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 ASB1Q9Y576 335 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 OTOGQ6ZRI0 2925 aa14.13□□□□□ -0.15
TGFB1-202ENST00000597453 DCHS2Q6V1P9 2916 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 SUPT3HB4E1H0 165 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 C19orf84I3L1E1 186 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 FCHO1O14526 889 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 B3GALT2O43825 422 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 PRKNO60260 465 aaPredicted RBP14.12□□□□□ -0.15
TGFB1-202ENST00000597453 SUPT3HO75486 399 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 ITGA10O75578 1167 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 SNRPB2P08579 225 aaKnown RBP14.12□□□□□ -0.15
TGFB1-202ENST00000597453 COL6A2P12110 1019 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 ABOP16442 354 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 CERS1P27544 350 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 GSTM2P28161 218 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 PTGER1P34995 402 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 MEOX1P50221 254 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 GPR143P51810 404 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 HSD17B7P56937 341 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 SLC13A2Q13183 592 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 DOC2AQ14183 400 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 NAA30Q147X3 362 aaPredicted RBP14.12□□□□□ -0.15
TGFB1-202ENST00000597453 XKRXQ6PP77 449 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 C16orf47Q6ZP98 133 aaPredicted RBP14.12□□□□□ -0.15
TGFB1-202ENST00000597453 MDGA2Q7Z553 956 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 DOLPP1Q86YN1 238 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 SULF2Q8IWU5 870 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 KRT78Q8N1N4 520 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 GHDCQ8N2G8 530 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 SNX31Q8N9S9 440 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 OR2L5Q8NG80 312 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 AGAP11Q8TF27 550 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 UBTD2Q8WUN7 234 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 UBLCP1Q8WVY7 318 aaPredicted RBP14.12□□□□□ -0.15
TGFB1-202ENST00000597453 EXT2Q93063 718 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 NCLNQ969V3 563 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 TMEM125Q96AQ2 219 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 PHF12Q96QT6 1004 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 CCDC77Q9BR77 488 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 REXO4Q9GZR2 422 aaKnown RBP14.12□□□□□ -0.15
TGFB1-202ENST00000597453 EHD1Q9H4M9 534 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 PSMC3IPQ9P2W1 217 aaPredicted RBP14.12□□□□□ -0.15
TGFB1-202ENST00000597453 FBXW2Q9UKT8 454 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 ZNF407Q9C0G0 2248 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 EML6Q6ZMW3 1958 aa14.12□□□□□ -0.15
TGFB1-202ENST00000597453 AKAP9Q99996 3911 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 IQANK1A0A1B0GTG1 560 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 ANKDD1BA6NHY2 528 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 UBXN8O00124 270 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 CLGNO14967 610 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 STK16O75716 305 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 MTHFD2P13995 350 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 EPORP19235 508 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 SMSP52788 366 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 LIM2P55344 173 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 TSNAXIP1Q2TAA8 658 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 XKR6Q5GH73 641 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 TECRLQ5HYJ1 363 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 TRIM40Q6P9F5 258 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 ABHD17CQ6PCB6 329 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 C3P1Q6ZMU1 363 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 TIFABQ6ZNK6 161 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 LRRC70Q7Z2Q7 622 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 CLNKQ7Z7G1 428 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 ZNF595Q8IYB9 648 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 CYP4Z2PQ8N1L4 340 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 PLD6Q8N2A8 252 aaKnown RBP14.11□□□□□ -0.15
TGFB1-202ENST00000597453 WDR34Q96EX3 536 aa14.11□□□□□ -0.15
TGFB1-202ENST00000597453 VMP1Q96GC9 406 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms