RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 SCN3AQ9NY46 2000 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 ARHGAP10A1A4S6 786 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 MANBAO00462 879 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 SLC28A2O43868 658 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 TRIM13O60858 407 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 CRCPO75575 148 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 ETHE1O95571 254 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 PDYNP01213 254 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 PPP2R1BP30154 601 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 BSGP35613 385 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 CASRP41180 1078 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 TAS2R50P59544 299 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 MFAP5Q13361 173 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 SERTAD2Q14140 314 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 TERF2Q15554 542 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 CEP85LQ5SZL2 805 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 EFCAB3Q8N7B9 438 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 GBP7Q8N8V2 638 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 BRIX1Q8TDN6 353 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 WDR77Q9BQA1 342 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 TRMOQ9BU70 441 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 SORBS1Q9BX66 1292 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 CENPHQ9H3R5 247 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 KCNK13Q9HB14 408 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 MMP25Q9NPA2 562 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 MID1IP1Q9NPA3 183 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 PTGFRNQ9P2B2 879 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 ZNF225Q9UK10 706 aa16.21■□□□□ 0.19
SHKBP1-212ENST00000596163 PCSK5Q92824 1860 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 A0A1B0GTL3 188 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 CTIFO43310 598 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 GUCY1B2O75343 617 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 SPAG7O75391 227 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 FAM58BPP0C7Q3 252 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 SLC26A5P58743 744 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 CSTF3Q12996 717 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 IGFL2Q6UWQ7 119 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 FRMD7Q6ZUT3 714 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 C10orf107Q8IVU9 208 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 TMEM132CQ8N3T6 1108 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 TCP10LQ8TDR4 215 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 AGAP11Q8TF27 550 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 TANKQ92844 425 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 PNPLA2Q96AD5 504 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 CNDP1Q96KN2 507 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 ZNF354BQ96LW1 612 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 ZIM3Q96PE6 472 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 FAM111AQ96PZ2 611 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 CSF3RQ99062 836 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 STMN4Q9H169 189 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 C12orf65Q9H3J6 166 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 RPF2Q9H7B2 306 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 PNO1Q9NRX1 252 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 VPS29Q9UBQ0 182 aa16.2■□□□□ 0.18
SHKBP1-212ENST00000596163 A0A0A6YYD5 115 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 SAGE2PA6NJ88 616 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 A8MUI8 341 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 PROM1O43490 865 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 EEDO75530 441 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 IFNA16P05015 189 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 ITGAMP11215 1152 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 CCNYL2Q5T2Q4 361 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 ABHD17BQ5VST6 288 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 LINC00696Q6ZRV3 163 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 METTL4Q8N3J2 472 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 SIRT6Q8N6T7 355 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 RBMXL3Q8N7X1 1067 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 TMEM52Q8NDY8 209 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 PSMF1Q92530 271 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 ZNF717Q9BY31 904 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 MFRPQ9BY79 579 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 ALOXE3Q9BYJ1 711 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 SSU72Q9NP77 194 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 ADAP2Q9NPF8 381 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 SLAMF7Q9NQ25 335 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 FARSBQ9NSD9 589 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 ABI3Q9P2A4 366 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 COL6A6A6NMZ7 2263 aa16.19■□□□□ 0.18
SHKBP1-212ENST00000596163 SPTA1P02549 2419 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 SERTM1A2A2V5 107 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 DYTNA2CJ06 578 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 A8MUA0 341 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 KLK1P06870 262 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 CELA2AP08217 269 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 TNNI3P19429 210 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 SOX11P35716 441 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 HNRNPFP52597 415 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 TNFRSF17Q02223 184 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 PCLAFQ15004 111 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 ELAVL1Q15717 326 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 NADK2Q4G0N4 442 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 MRM1Q6IN84 353 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 CLNKQ7Z7G1 428 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 SLC5A8Q8N695 610 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 DNAJB14Q8TBM8 379 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 DAZLQ92904 295 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 PGM2Q96G03 612 aa16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 MRPL1Q9BYD6 325 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 EML4Q9HC35 981 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-212ENST00000596163 STMN3Q9NZ72 180 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms