RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 QSOX2Q6ZRP7 698 aa16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 ARMC10Q8N2F6 343 aa16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 WDR34Q96EX3 536 aa16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 C14orf79Q96F83 325 aa16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 SPNS1Q9H2V7 528 aa16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 MRPL46Q9H2W6 279 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 CLK4Q9HAZ1 481 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-203ENST00000594298 E9PLN8 166 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 CHST10O43529 356 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 DNAJB6O75190 326 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 ABOP16442 354 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 ZNF24P17028 368 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 TPP2P29144 1249 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 TRHRP34981 398 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 KIR3DL1P43629 444 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 CYB561P49447 251 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 STXBP1P61764 594 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 PCDH1Q08174 1060 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 CHIT1Q13231 466 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 DOC2AQ14183 400 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 RASA2Q15283 850 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 MAPKAPK3Q16644 382 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 DEFB134Q4QY38 66 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 ZNF468Q5VIY5 522 aaPredicted RBP16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 ZNF227Q86WZ6 799 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 TDRPQ86YL5 185 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 DOLPP1Q86YN1 238 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 KIF2BQ8N4N8 673 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 TEX9Q8N6V9 391 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 ANKRD53Q8N9V6 530 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 ACBD4Q8NC06 268 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 AGAP11Q8TF27 550 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 SPOCK3Q9BQ16 436 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 VKORC1Q9BQB6 163 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 PRM3Q9NNZ6 103 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 ZNF358Q9NW07 568 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 TBK1Q9UHD2 729 aa16.4■□□□□ 0.22
SHKBP1-203ENST00000594298 NCOA6Q14686 2063 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 SAGE2PA6NJ88 616 aa16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 CLEC3AO75596 197 aa16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 GSTA1P08263 222 aa16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 TAC1P20366 129 aa16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 HSD17B3P37058 310 aa16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 MLF1P58340 268 aa16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 RNFT1Q5M7Z0 435 aa16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 EID3Q8N140 333 aa16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 PTGR2Q8N8N7 351 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 POGLUT1Q8NBL1 392 aa16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 CCT6BQ92526 530 aa16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 DMRTA2Q96SC8 542 aa16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 SLC6A16Q9GZN6 736 aa16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 XPR1Q9UBH6 696 aa16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 DCDC2Q9UHG0 476 aa16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 ASB1Q9Y576 335 aa16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 SCN2AQ99250 2005 aa16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 TEP1Q99973 2627 aaKnown RBP16.39■□□□□ 0.21
SHKBP1-203ENST00000594298 A0A088AWK7 358 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 IGKV3D-11A0A0A0MRZ8 115 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 TCRBV16S1A1N1A0A5B0 115 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 STX16-NPEPL1H3BU86 382 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 STX16O14662 325 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 PRRG2O14669 202 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 ADAM10O14672 748 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 PRMT3O60678 531 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 B4GALT2O60909 372 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 CDH16O75309 829 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 SHBGP04278 402 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 KRT15P19012 456 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 CAPN3P20807 821 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 ZNF10P21506 573 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 SERPINB1P30740 379 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 HNF4AP41235 474 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 HLCSP50747 726 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 OLR1P78380 273 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 HSF1Q00613 529 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 TGM3Q08188 693 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 ERCC6LQ2NKX8 1250 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 FGD2Q7Z6J4 655 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 CPSF7Q8N684 471 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 NFAM1Q8NET5 270 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 UTP15Q8TED0 518 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 CREB3L4Q8TEY5 395 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 AENQ8WTP8 325 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 CAVIN3Q969G5 261 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 FAR2Q96K12 515 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 PTCHD1Q96NR3 888 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 ENKD1Q9H0I2 346 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 RHBGQ9H310 441 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 ADGRE2Q9UHX3 823 aa16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 V9GYY5 206 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-203ENST00000594298 UGDHO60701 494 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 B3GALT4O96024 378 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 ZNF888P0CJ79 500 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 PYGBP11216 843 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 EPORP19235 508 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 BTG2P78543 158 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 IFFO1Q0D2I5 559 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 GTF2H2Q13888 395 aa16.37■□□□□ 0.21
SHKBP1-203ENST00000594298 E2F2Q14209 437 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms