RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 TP63Q9H3D4 680 aaPredicted RBP17.54■□□□□ 0.4
CCDC43-205ENST00000592333 HPF1Q9NWY4 346 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 PPT2Q9UMR5 302 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 ERVK-11Q9UQG0 969 aa17.54■□□□□ 0.4
CCDC43-205ENST00000592333 A0A0G2JN53 185 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 A0A1B0GTH9 108 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 TMEM200CA6NKL6 621 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 PRAMEF4O60810 478 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 OR2J2O76002 312 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 HNRNPFP52597 415 aaKnown RBP17.53■□□□□ 0.4
CCDC43-205ENST00000592333 HSF1Q00613 529 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 CHIT1Q13231 466 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 NAB1Q13506 487 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 OR4D1Q15615 310 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 NDUFAF5Q5TEU4 345 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 PRAMEF9Q5VWM5 478 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 LAS2Q8IYD9 372 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 ZNF295-AS1Q8N0V1 137 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 SNX31Q8N9S9 440 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 FAM47BQ8NA70 645 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 PTPMT1Q8WUK0 201 aaPredicted RBP17.53■□□□□ 0.4
CCDC43-205ENST00000592333 CAB39LQ9H9S4 337 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 NMRAL1Q9HBL8 299 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 SAYSD1Q9NPB0 183 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 MS4A12Q9NXJ0 267 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 NUDT4Q9NZJ9 180 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 RNF112Q9ULX5 631 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 TSC22D4Q9Y3Q8 395 aa17.53■□□□□ 0.4
CCDC43-205ENST00000592333 CXorf49A8MYA2 514 aaPredicted RBP17.52■□□□□ 0.4
CCDC43-205ENST00000592333 ACOT7O00154 380 aa17.52■□□□□ 0.4
CCDC43-205ENST00000592333 PHGDHO43175 533 aaKnown RBP17.52■□□□□ 0.4
CCDC43-205ENST00000592333 HS6ST1O60243 411 aa17.52■□□□□ 0.4
CCDC43-205ENST00000592333 IFNA16P05015 189 aa17.52■□□□□ 0.4
CCDC43-205ENST00000592333 CD22P20273 847 aa17.52■□□□□ 0.4
CCDC43-205ENST00000592333 CERS1P27544 350 aa17.52■□□□□ 0.4
CCDC43-205ENST00000592333 CRABP2P29373 138 aa17.52■□□□□ 0.4
CCDC43-205ENST00000592333 TBL3Q12788 808 aaKnown RBP17.52■□□□□ 0.4
CCDC43-205ENST00000592333 ZNF473Q8WTR7 871 aaKnown RBP17.52■□□□□ 0.4
CCDC43-205ENST00000592333 UBTD2Q8WUN7 234 aa17.52■□□□□ 0.4
CCDC43-205ENST00000592333 ANP32BQ92688 251 aaKnown RBP17.52■□□□□ 0.4
CCDC43-205ENST00000592333 CMTM7Q96FZ5 175 aa17.52■□□□□ 0.4
CCDC43-205ENST00000592333 F2RL3Q96RI0 385 aa17.52■□□□□ 0.4
CCDC43-205ENST00000592333 RASL10BQ96S79 203 aa17.52■□□□□ 0.4
CCDC43-205ENST00000592333 MS4A8Q9BY19 250 aa17.52■□□□□ 0.4
CCDC43-205ENST00000592333 ZDHHC11Q9H8X9 412 aa17.52■□□□□ 0.4
CCDC43-205ENST00000592333 DCHS2Q6V1P9 2916 aa17.52■□□□□ 0.4
CCDC43-205ENST00000592333 ADGRG4Q8IZF6 3080 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 CACNA1CQ13936 2221 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 OR14I1A6ND48 311 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 CCNT2O60583 730 aaKnown RBP17.51■□□□□ 0.39
CCDC43-205ENST00000592333 C1QAP02745 245 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 TPOP07202 933 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 EPORP19235 508 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 CNR1P21554 472 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 HIST1H1TP22492 207 aaPredicted RBP17.51■□□□□ 0.39
CCDC43-205ENST00000592333 ATP5A1P25705 553 aaKnown RBP17.51■□□□□ 0.39
CCDC43-205ENST00000592333 PPP2R1BP30154 601 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 KIR3DL1P43629 444 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 IGLV3-21P80748 117 aaPredicted RBP17.51■□□□□ 0.39
CCDC43-205ENST00000592333 CDSNQ15517 529 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 MPEG1Q2M385 716 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 AP5B1Q2VPB7 878 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 MED27Q6P2C8 311 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 OPN5Q6U736 354 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 RTL4Q6ZR62 310 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 GK5Q6ZS86 529 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 CAPN12Q6ZSI9 719 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 ISCA2Q86U28 154 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 SLC22A16Q86VW1 577 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 SPATA6LQ8N4H0 392 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 ACOT4Q8N9L9 421 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 SPATA4Q8NEY3 305 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 SDCCAG3Q96C92 435 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 CSF3RQ99062 836 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 UTP11Q9Y3A2 253 aaKnown RBP17.51■□□□□ 0.39
CCDC43-205ENST00000592333 TACC2O95359 2948 aa17.51■□□□□ 0.39
CCDC43-205ENST00000592333 SYCE1LA8MT33 242 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 C19orf84I3L1E1 186 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 DYRK3O43781 588 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 PRKNO60260 465 aaPredicted RBP17.5■□□□□ 0.39
CCDC43-205ENST00000592333 KERAO60938 352 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 COX7A2P14406 83 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 STX2P32856 288 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 PIK3CBP42338 1070 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 MSH2P43246 934 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 HK2P52789 917 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 RNF4P78317 190 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 HYAL4Q2M3T9 481 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 ACAD11Q709F0 780 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 UBE3DQ7Z6J8 389 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 CLNKQ7Z7G1 428 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 TBC1D1Q86TI0 1168 aaPredicted RBP17.5■□□□□ 0.39
CCDC43-205ENST00000592333 CD163Q86VB7 1156 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 DND1Q8IYX4 353 aaKnown RBP17.5■□□□□ 0.39
CCDC43-205ENST00000592333 OR2M7Q8NG81 312 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 RHEBL1Q8TAI7 183 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 NUBPLQ8TB37 319 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 ESAMQ96AP7 390 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 FAM173AQ9BQD7 235 aa17.5■□□□□ 0.39
CCDC43-205ENST00000592333 CENPKQ9BS16 269 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms