RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 HNRNPH1P31943 449 aaKnown RBP9.69□□□□□ -0.86
VPS4B-207ENST00000591519 HPDP32754 393 aaPredicted RBP9.69□□□□□ -0.86
VPS4B-207ENST00000591519 STX2P32856 288 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 GDF5P43026 501 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 POU4F1Q01851 419 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 CACNA1CQ13936 2221 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 SLMAPQ14BN4 828 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 TGFBIQ15582 683 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 ZNF595Q8IYB9 648 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 SPATA6LQ8N4H0 392 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 WDR34Q96EX3 536 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 C14orf79Q96F83 325 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 VMP1Q96GC9 406 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 FAR2Q96K12 515 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 LURAP1Q96LR2 239 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 CPNE1Q99829 537 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 TREX2Q9BQ50 279 aaPredicted RBP9.69□□□□□ -0.86
VPS4B-207ENST00000591519 PHACTR1Q9C0D0 580 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 DERL2Q9GZP9 239 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 RHBGQ9H310 441 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 CDC42EP4Q9H3Q1 356 aaKnown RBP9.69□□□□□ -0.86
VPS4B-207ENST00000591519 RHOJQ9H4E5 214 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 NSMCE4AQ9NXX6 385 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 CTNNAL1Q9UBT7 734 aa9.69□□□□□ -0.86
VPS4B-207ENST00000591519 ZNF223Q9UK11 482 aaPredicted RBP9.69□□□□□ -0.86
VPS4B-207ENST00000591519 ZNF490Q9ULM2 529 aaPredicted RBP9.69□□□□□ -0.86
VPS4B-207ENST00000591519 YARS2Q9Y2Z4 477 aaKnown RBP9.69□□□□□ -0.86
VPS4B-207ENST00000591519 A0A088AWK7 358 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 NPEPPSL1A6NEC2 478 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 TMEM200CA6NKL6 621 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 A8MUA0 341 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 TGFBR3LH3BV60 316 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 TAPBPO15533 448 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 PHGDHO43175 533 aaKnown RBP9.68□□□□□ -0.86
VPS4B-207ENST00000591519 PEX1O43933 1283 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 PRAMEF4O60810 478 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 CTNSO60931 367 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 ITGA10O75578 1167 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 ZFAND5O76080 213 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 MYO1DO94832 1006 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 WDR47O94967 919 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 GSTA2P09210 222 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 FBXO45P0C2W1 286 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 CAPN3P20807 821 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 ZNF10P21506 573 aaPredicted RBP9.68□□□□□ -0.86
VPS4B-207ENST00000591519 SSTR2P30874 369 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 PTGS2P35354 604 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 GP5P40197 560 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 MEOX1P50221 254 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 RAB38P57729 211 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 HSF1Q00613 529 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 E2F2Q14209 437 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 TSNQ15631 228 aaKnown RBP9.68□□□□□ -0.86
VPS4B-207ENST00000591519 C18orf21Q32NC0 220 aaPredicted RBP9.68□□□□□ -0.86
VPS4B-207ENST00000591519 PRAMEF9Q5VWM5 478 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 MDGA2Q7Z553 956 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 VN1R5Q7Z5H4 357 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 GPALPP1Q8IXQ4 340 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 IFT20Q8IY31 132 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.68□□□□□ -0.86
VPS4B-207ENST00000591519 KRT78Q8N1N4 520 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 TCAIMQ8N3R3 496 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 TMEM156Q8N614 296 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 TMEM52Q8NDY8 209 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 OR2L5Q8NG80 312 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 FAM57AQ8TBR7 257 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 SERINC2Q96SA4 455 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 RBBP8Q99708 897 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 EGFL8Q99944 293 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 ADAP2Q9NPF8 381 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 PRDM7Q9NQW5 492 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 PRTFDC1Q9NRG1 225 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 KCMF1Q9P0J7 381 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 DAPP1Q9UN19 280 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 HRH3Q9Y5N1 445 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 DCHS2Q6V1P9 2916 aa9.68□□□□□ -0.86
VPS4B-207ENST00000591519 CSMD2Q7Z408 3487 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 TRBV11-1A0A0K0K1C0 115 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 A0A1B0GTH9 108 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 ANKDD1BA6NHY2 528 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 ZNHIT1O43257 154 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 ERI3O43414 337 aaKnown RBP9.67□□□□□ -0.86
VPS4B-207ENST00000591519 B3GALT2O43825 422 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 C1QAP02745 245 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 SNRPB2P08579 225 aaKnown RBP9.67□□□□□ -0.86
VPS4B-207ENST00000591519 FAM153BP0C7A2 387 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 PTGER1P34995 402 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 PHBP35232 272 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 SPRP35270 261 aaPredicted RBP9.67□□□□□ -0.86
VPS4B-207ENST00000591519 CASP2P42575 452 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 HNRNPFP52597 415 aaKnown RBP9.67□□□□□ -0.86
VPS4B-207ENST00000591519 LIM2P55344 173 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 PCDH1Q08174 1060 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 BMPR2Q13873 1038 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 SLBPQ14493 270 aaKnown RBP eCLIP9.67□□□□□ -0.86
VPS4B-207ENST00000591519 ELAVL1Q15717 326 aaKnown RBP9.67□□□□□ -0.86
VPS4B-207ENST00000591519 TBCCQ15814 346 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 FAM153CQ494X1 144 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 CMPK2Q5EBM0 449 aa9.67□□□□□ -0.86
VPS4B-207ENST00000591519 XKR6Q5GH73 641 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms