RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 GATA5Q9BWX5 397 aaPredicted RBP10.8□□□□□ -0.68
VMP1-211ENST00000591315 MRPL1Q9BYD6 325 aaKnown RBP10.8□□□□□ -0.68
VMP1-211ENST00000591315 ELOVL6Q9H5J4 265 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 CLK4Q9HAZ1 481 aaKnown RBP10.8□□□□□ -0.68
VMP1-211ENST00000591315 RIC8BQ9NVN3 520 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 OXSMQ9NWU1 459 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 TRPS1Q9UHF7 1281 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 ADGRE2Q9UHX3 823 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 SLC12A4Q9UP95 1085 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 ZNF451Q9Y4E5 1061 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 CPAMD8Q8IZJ3 1885 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 A0A0A6YYD5 115 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 A0A1W2PR48 441 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 A0A1W2PS29 197 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 GLOD5A6NK44 160 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 A8MUI8 341 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 ALDH3A1P30838 453 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 SOX11P35716 441 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 MLLT10P55197 1068 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 SLC26A5P58743 744 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 DNAJB13P59910 316 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 LCP2Q13094 533 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 SLC13A2Q13183 592 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 CUL3Q13618 768 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 IGFBP7Q16270 282 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 CEP85LQ5SZL2 805 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 AGAP7PQ5VUJ5 663 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 SLC6A19Q695T7 634 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 PLAG1Q6DJT9 500 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 MRM1Q6IN84 353 aaKnown RBP10.79□□□□□ -0.68
VMP1-211ENST00000591315 DGAT2L6Q6ZPD8 337 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 ZNF605Q86T29 641 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 MMP21Q8N119 569 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 CATSPER1Q8NEC5 780 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 SRFBP1Q8NEF9 429 aaKnown RBP10.79□□□□□ -0.68
VMP1-211ENST00000591315 NFAM1Q8NET5 270 aaPredicted RBP10.79□□□□□ -0.68
VMP1-211ENST00000591315 METTL6Q8TCB7 284 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 SELENOMQ8WWX9 145 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 ANKRD9Q96BM1 317 aaPredicted RBP10.79□□□□□ -0.68
VMP1-211ENST00000591315 AGAP4Q96P64 663 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 SERPINI1Q99574 410 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 CENPHQ9H3R5 247 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 DDX31Q9H8H2 851 aaKnown RBP10.79□□□□□ -0.68
VMP1-211ENST00000591315 LYRM4Q9HD34 91 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 MID1IP1Q9NPA3 183 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 PNO1Q9NRX1 252 aaKnown RBP10.79□□□□□ -0.68
VMP1-211ENST00000591315 MKS1Q9NXB0 559 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 C19orf25Q9UFG5 118 aaPredicted RBP10.79□□□□□ -0.68
VMP1-211ENST00000591315 ASB4Q9Y574 426 aa10.79□□□□□ -0.68
VMP1-211ENST00000591315 HEMK1Q9Y5R4 338 aaPredicted RBP10.79□□□□□ -0.68
VMP1-211ENST00000591315 A0A088AWK7 358 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 PROM1O43490 865 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 TYROBPO43914 113 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 FGF17O60258 216 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 CTNSO60931 367 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 MYO1DO94832 1006 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 KLK1P06870 262 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 CYC1P08574 325 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 ZNF10P21506 573 aaPredicted RBP10.78□□□□□ -0.68
VMP1-211ENST00000591315 CPN2P22792 545 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 TPP2P29144 1249 aaPredicted RBP10.78□□□□□ -0.68
VMP1-211ENST00000591315 ARRB2P32121 409 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 HPDP32754 393 aaPredicted RBP10.78□□□□□ -0.68
VMP1-211ENST00000591315 PHEXP78562 749 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 HMGCS1Q01581 520 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 TLE1Q04724 770 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 GALNT1Q10472 559 aaPredicted RBP10.78□□□□□ -0.68
VMP1-211ENST00000591315 TBL3Q12788 808 aaKnown RBP10.78□□□□□ -0.68
VMP1-211ENST00000591315 MPP2Q14168 576 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 BEND6Q5SZJ8 279 aaPredicted RBP10.78□□□□□ -0.68
VMP1-211ENST00000591315 CES4AQ5XG92 561 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 JMJD6Q6NYC1 403 aaPredicted RBP10.78□□□□□ -0.68
VMP1-211ENST00000591315 ISLR2Q6UXK2 745 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 ZCCHC23Q6ZST2 131 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 FRMD7Q6ZUT3 714 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 CUZD1Q86UP6 607 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 GPR180Q86V85 440 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 EXOC3L1Q86VI1 746 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 METTL4Q8N3J2 472 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 ZNF321PQ8N8H1 164 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 RDH11Q8TC12 318 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 VPS50Q96JG6 964 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 LPAR4Q99677 370 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 ALOXE3Q9BYJ1 711 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 ROGDIQ9GZN7 287 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 KCNK13Q9HB14 408 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 TEX10Q9NXF1 929 aaPredicted RBP10.78□□□□□ -0.68
VMP1-211ENST00000591315 PSD3Q9NYI0 1048 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 ZNF223Q9UK11 482 aaPredicted RBP10.78□□□□□ -0.68
VMP1-211ENST00000591315 MMACHCQ9Y4U1 282 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 PTGDR2Q9Y5Y4 395 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 RELNP78509 3460 aa10.78□□□□□ -0.68
VMP1-211ENST00000591315 SAGE2PA6NJ88 616 aa10.77□□□□□ -0.69
VMP1-211ENST00000591315 PCDH17O14917 1159 aa10.77□□□□□ -0.69
VMP1-211ENST00000591315 PGRMC2O15173 223 aa10.77□□□□□ -0.69
VMP1-211ENST00000591315 RGS16O15492 202 aaPredicted RBP10.77□□□□□ -0.69
VMP1-211ENST00000591315 SEMA3DO95025 777 aa10.77□□□□□ -0.69
VMP1-211ENST00000591315 ESRRBO95718 433 aa10.77□□□□□ -0.69
VMP1-211ENST00000591315 MLYCDO95822 493 aa10.77□□□□□ -0.69
VMP1-211ENST00000591315 AIFM1O95831 613 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms