RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 CLCA3PQ9Y6N3 262 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 UBR5O95071 2799 aaPredicted RBP11.3□□□□□ -0.6
TPM4-212ENST00000590180 HECTD1Q9ULT8 2610 aa11.3□□□□□ -0.6
TPM4-212ENST00000590180 TRBV11-1A0A0K0K1C0 115 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 A0A1W2PPM1 405 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 SMIM23A6NLE4 172 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 GABRR3A8MPY1 467 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 A8MT66 165 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 TGFBR3LH3BV60 316 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 FOXE1O00358 373 aaPredicted RBP11.29□□□□□ -0.6
TPM4-212ENST00000590180 PLPP1O14494 284 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 LDB3O75112 727 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 SUPT7LO94864 414 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 RASAL1O95294 804 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 SBK3P0C264 359 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 TLX1P31314 330 aaPredicted RBP11.29□□□□□ -0.6
TPM4-212ENST00000590180 SLCO1A2P46721 670 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 SRSF1Q07955 248 aaKnown RBP eCLIP11.29□□□□□ -0.62e-6■□□□□ 8.5
TPM4-212ENST00000590180 IFT88Q13099 833 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 TUBA3CQ13748 450 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 OR1C1Q15619 314 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 ZNF766Q5HY98 468 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 SPINK14Q6IE38 97 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 TUBA3EQ6PEY2 450 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 CYP20A1Q6UW02 462 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 GPR180Q86V85 440 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 OR4N5Q8IXE1 308 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 TMEM132CQ8N3T6 1108 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 B3GNT7Q8NFL0 401 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 OR4F6Q8NGB9 312 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 WDR20Q8TBZ3 569 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 ACMSDQ8TDX5 336 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 TRPC4APQ8TEL6 797 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 THAP3Q8WTV1 239 aaPredicted RBP11.29□□□□□ -0.6
TPM4-212ENST00000590180 NCLNQ969V3 563 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 SERPINI1Q99574 410 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 NPAS2Q99743 824 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 ELOVL6Q9H5J4 265 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 ZBTB26Q9HCK0 441 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 KLHL1Q9NR64 748 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 OLAHQ9NV23 265 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 MS4A12Q9NXJ0 267 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 PSD3Q9NYI0 1048 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 DCDC2Q9UHG0 476 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 POLEQ07864 2286 aa11.29□□□□□ -0.6
TPM4-212ENST00000590180 BLACEA4D250 179 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 FOXO6A8MYZ6 492 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 PPP6CO00743 305 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 DLX3O60479 287 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 SCELO95171 688 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 ETHE1O95571 254 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 OTCP00480 354 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 SHBGP04278 402 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 CD46P15529 392 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 KRT15P19012 456 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 HSD17B3P37058 310 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 MLF1P58340 268 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 CLCQ05315 142 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 SRSF11Q05519 484 aaKnown RBP11.28□□□□□ -0.6
TPM4-212ENST00000590180 CUL3Q13618 768 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 SERTAD2Q14140 314 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 ELAVL1Q15717 326 aaKnown RBP11.28□□□□□ -0.6
TPM4-212ENST00000590180 UNC50Q53HI1 259 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 FRG2Q64ET8 278 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 C18orf63Q68DL7 685 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 LCA5Q86VQ0 697 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 ZGRF1Q86YA3 2104 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 CNPY4Q8N129 248 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 LGI4Q8N135 537 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 HORMAD2Q8N7B1 307 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 ZNF483Q8TF39 744 aaPredicted RBP11.28□□□□□ -0.6
TPM4-212ENST00000590180 SREK1Q8WXA9 508 aaKnown RBP11.28□□□□□ -0.6
TPM4-212ENST00000590180 DAZLQ92904 295 aaKnown RBP11.28□□□□□ -0.6
TPM4-212ENST00000590180 VMP1Q96GC9 406 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 C5orf34Q96MH7 638 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 SIGLEC12Q96PQ1 595 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 FRG2BQ96QU4 278 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 BARD1Q99728 777 aaKnown RBP11.28□□□□□ -0.6
TPM4-212ENST00000590180 RPF2Q9H7B2 306 aaKnown RBP11.28□□□□□ -0.6
TPM4-212ENST00000590180 ADAP2Q9NPF8 381 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 AHSPQ9NZD4 102 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 LRFN1Q9P244 771 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 VTI1BQ9UEU0 232 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 PHF11Q9UIL8 331 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 CLDN16Q9Y5I7 305 aa11.28□□□□□ -0.6
TPM4-212ENST00000590180 TLDC2A0PJX2 215 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 SYNDIG1LA6NDD5 238 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 C17orf105B2RV13 164 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 FCHO1O14526 889 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 EEDO75530 441 aaKnown RBP11.27□□□□□ -0.61
TPM4-212ENST00000590180 ZFAND5O76080 213 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 CRYABP02511 175 aaKnown RBP11.27□□□□□ -0.61
TPM4-212ENST00000590180 GBAP04062 536 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 GSTA1P08263 222 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 RPS17P08708 135 aaKnown RBP11.27□□□□□ -0.61
TPM4-212ENST00000590180 FAM58BPP0C7Q3 252 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 EDN3P14138 238 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 IMPDH1P20839 514 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 ATP5F1P24539 256 aaPredicted RBP11.27□□□□□ -0.61
TPM4-212ENST00000590180 TNFRSF8P28908 595 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms