RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 ELAVL1Q15717 326 aaKnown RBP19.2■□□□□ 0.66
CIRBP-226ENST00000590171 OR4C11Q6IEV9 310 aa19.2■□□□□ 0.66
CIRBP-226ENST00000590171 SLC25A25Q6KCM7 469 aa19.2■□□□□ 0.66
CIRBP-226ENST00000590171 GALNTL5Q7Z4T8 443 aa19.2■□□□□ 0.66
CIRBP-226ENST00000590171 HORMAD2Q8N7B1 307 aa19.2■□□□□ 0.66
CIRBP-226ENST00000590171 THAP3Q8WTV1 239 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-226ENST00000590171 TRIM45Q9H8W5 580 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-226ENST00000590171 SEC14L3Q9UDX4 400 aa19.2■□□□□ 0.66
CIRBP-226ENST00000590171 FBXW2Q9UKT8 454 aa19.2■□□□□ 0.66
CIRBP-226ENST00000590171 PCDHGA11Q9Y5H2 935 aa19.2■□□□□ 0.66
CIRBP-226ENST00000590171 SPTAN1Q13813 2472 aaKnown RBP19.19■□□□□ 0.66
CIRBP-226ENST00000590171 ASPDHA6ND91 283 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 SYNDIG1LA6NDD5 238 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 H0YIV9 168 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 PLPP1O14494 284 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 UGDHO60701 494 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 LDB3O75112 727 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 SLC25A12O75746 678 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 CLDN1O95832 211 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 IFNA16P05015 189 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 RBP1P09455 135 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 CNTFP26441 200 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 TRHRP34981 398 aaPredicted RBP19.19■□□□□ 0.66
CIRBP-226ENST00000590171 PIK3CGP48736 1102 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 CYB561P49447 251 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 RPS13P62277 151 aaKnown RBP19.19■□□□□ 0.66
CIRBP-226ENST00000590171 CPSF6Q16630 551 aaKnown RBP eCLIP19.19■□□□□ 0.66
CIRBP-226ENST00000590171 TSNAXIP1Q2TAA8 658 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 C1QL3Q5VWW1 255 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 METTL2BQ6P1Q9 378 aaKnown RBP19.19■□□□□ 0.66
CIRBP-226ENST00000590171 L3MBTL4Q8NA19 623 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 PHF21BQ96EK2 531 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 FRMD6Q96NE9 622 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 ALOXE3Q9BYJ1 711 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 RNF11Q9Y3C5 154 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 SPACA6W5XKT8 324 aa19.19■□□□□ 0.66
CIRBP-226ENST00000590171 POLEQ07864 2286 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 UTP20O75691 2785 aaKnown RBP19.18■□□□□ 0.66
CIRBP-226ENST00000590171 FCHO1O14526 889 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 OR7A17O14581 309 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 PRKNO60260 465 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-226ENST00000590171 NME2P1O60361 137 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 COL6A2P12110 1019 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 NME2P22392 152 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 CPN2P22792 545 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 HLCSP50747 726 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 RAP1GDS1P52306 607 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 ID2Q02363 134 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 STX4Q12846 297 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 TMEM132CQ8N3T6 1108 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 OR52B6Q8NGF0 335 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 WDR20Q8TBZ3 569 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 PTPMT1Q8WUK0 201 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-226ENST00000590171 RGMAQ96B86 450 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 SCYL1Q96KG9 808 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 CDK15Q96Q40 435 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 NOL11Q9H8H0 719 aaKnown RBP19.18■□□□□ 0.66
CIRBP-226ENST00000590171 VTI1BQ9UEU0 232 aa19.18■□□□□ 0.66
CIRBP-226ENST00000590171 EXOC1LA0A1B0GW35 172 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 STX16-NPEPL1H3BU86 382 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 STX16O14662 325 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 ITGA10O75578 1167 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 ETHE1O95571 254 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 ABHD2P08910 425 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 GCAP28676 217 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 SLAMF1Q13291 335 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 ZRSR2Q15696 482 aaKnown RBP19.17■□□□□ 0.66
CIRBP-226ENST00000590171 MAPKAPK3Q16644 382 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 MAMDC2Q7Z304 686 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-226ENST00000590171 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-226ENST00000590171 FJX1Q86VR8 437 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 IFT20Q8IY31 132 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 ANKRD9Q96BM1 317 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-226ENST00000590171 REPS1Q96D71 796 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 NSUN5Q96P11 429 aaKnown RBP19.17■□□□□ 0.66
CIRBP-226ENST00000590171 CCDC77Q9BR77 488 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 CENPKQ9BS16 269 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 ZNF717Q9BY31 904 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-226ENST00000590171 ZBTB26Q9HCK0 441 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 PCTPQ9UKL6 214 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 TMCO1Q9UM00 188 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 CLCA3PQ9Y6N3 262 aa19.17■□□□□ 0.66
CIRBP-226ENST00000590171 DOPEY1Q5JWR5 2465 aa19.16■□□□□ 0.66
CIRBP-226ENST00000590171 ICE1Q9Y2F5 2266 aa19.16■□□□□ 0.66
CIRBP-226ENST00000590171 A0A1B0GUH1 482 aa19.16■□□□□ 0.66
CIRBP-226ENST00000590171 TMEM200CA6NKL6 621 aa19.16■□□□□ 0.66
CIRBP-226ENST00000590171 FGF17O60258 216 aa19.16■□□□□ 0.66
CIRBP-226ENST00000590171 SMIM24O75264 130 aa19.16■□□□□ 0.66
CIRBP-226ENST00000590171 ZFAND5O76080 213 aa19.16■□□□□ 0.66
CIRBP-226ENST00000590171 CLDN9O95484 217 aa19.16■□□□□ 0.66
CIRBP-226ENST00000590171 SNRPAP09012 282 aaKnown RBP19.16■□□□□ 0.66
CIRBP-226ENST00000590171 PTX3P26022 381 aaPredicted RBP19.16■□□□□ 0.66
CIRBP-226ENST00000590171 NEK2P51955 445 aa19.16■□□□□ 0.66
CIRBP-226ENST00000590171 PER3P56645 1201 aa19.16■□□□□ 0.66
CIRBP-226ENST00000590171 PHEXP78562 749 aa19.16■□□□□ 0.66
CIRBP-226ENST00000590171 SERTAD2Q14140 314 aa19.16■□□□□ 0.66
CIRBP-226ENST00000590171 C16orf47Q6ZP98 133 aaPredicted RBP19.16■□□□□ 0.66
CIRBP-226ENST00000590171 ZCCHC7Q8N3Z6 543 aaKnown RBP19.16■□□□□ 0.66
CIRBP-226ENST00000590171 ZNF321PQ8N8H1 164 aa19.16■□□□□ 0.66
CIRBP-226ENST00000590171 FAM98AQ8NCA5 519 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms