RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 ALDH9A1P49189 494 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 GZMMP51124 257 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 POLE2P56282 527 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 RAB8AP61006 207 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 ARF3P61204 181 aaPredicted RBP11.44□□□□□ -0.58
CCBE1-203ENST00000589116 HBA1P69905 142 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 NR1D2Q14995 579 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 MLC1Q15049 377 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 SHBQ15464 509 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 ZNF528Q3MIS6 628 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 GLYATQ6IB77 296 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 FRMPD2BQ6IN97 320 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 IRGCQ6NXR0 463 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 ERICH5Q6P6B1 374 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 MICU2Q8IYU8 434 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 PQLC1Q8N2U9 271 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 DTWD1Q8N5C7 304 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 AMER3Q8N944 861 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 ZFP90Q8TF47 636 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 OR5P2Q8WZ92 322 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 CIDECQ96AQ7 238 aaPredicted RBP11.44□□□□□ -0.58
CCBE1-203ENST00000589116 ZBED6CLQ96FA7 236 aaPredicted RBP11.44□□□□□ -0.58
CCBE1-203ENST00000589116 TCTN2Q96GX1 697 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 NSMCE2Q96MF7 247 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 SERINC2Q96SA4 455 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 DUSP23Q9BVJ7 150 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 CHRNA10Q9GZZ6 450 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 KLHL25Q9H0H3 589 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 RAD21L1Q9H4I0 556 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 GORASP2Q9H8Y8 452 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 PRDM9Q9NQV7 894 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 ACSS1Q9NUB1 689 aaPredicted RBP11.44□□□□□ -0.58
CCBE1-203ENST00000589116 NLGN3Q9NZ94 848 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 LRIT1Q9P2V4 623 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 PHF11Q9UIL8 331 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 ERVK-11Q9UQG0 969 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 OTOGLQ3ZCN5 2332 aa11.44□□□□□ -0.58
CCBE1-203ENST00000589116 GOLGA4Q13439 2230 aaKnown RBP11.44□□□□□ -0.58
CCBE1-203ENST00000589116 A0A1B0GTQ1 180 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 DHRS12A0PJE2 317 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 TXNDC9O14530 226 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 GSTA4O15217 222 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 SP9P0CG40 484 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 GIMD1P0DJR0 217 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 GLB1P16278 677 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 EFNA1P20827 205 aaPredicted RBP11.43□□□□□ -0.58
CCBE1-203ENST00000589116 PCBP4P57723 403 aaKnown RBP11.43□□□□□ -0.58
CCBE1-203ENST00000589116 BTN3A2P78410 334 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 GPLD1P80108 840 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 BNIP3Q12983 259 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 GAB1Q13480 694 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 CPZQ66K79 652 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 CEP68Q76N32 757 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 SPPL2CQ8IUH8 684 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 SLC35F3Q8IY50 421 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 MMP21Q8N119 569 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 CSNK1A1LQ8N752 337 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 CEP76Q8TAP6 659 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 PIGKQ92643 395 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 ZDHHC12Q96GR4 267 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 CCDC3Q9BQI4 270 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 VCX3BQ9H321 246 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 PIF1Q9H611 641 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 CCM2LQ9NUG4 571 aaPredicted RBP11.43□□□□□ -0.58
CCBE1-203ENST00000589116 ARMC1Q9NVT9 282 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 MS4A12Q9NXJ0 267 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 USP22Q9UPT9 525 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 AP4S1Q9Y587 144 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 RNF215Q9Y6U7 377 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 FRYLO94915 3013 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 PI4KAP42356 2102 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 NUP214P35658 2090 aaPredicted RBP11.43□□□□□ -0.58
CCBE1-203ENST00000589116 LOC105369274A0A096LPK9 316 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 LOC102723532A0A0G2JNH3 316 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 TCRBV5S2A0A599 114 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 CASQ2O14958 399 aaPredicted RBP11.43□□□□□ -0.58
CCBE1-203ENST00000589116 SRPX2O60687 465 aaPredicted RBP11.43□□□□□ -0.58
CCBE1-203ENST00000589116 AIFM1O95831 613 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 ALPPL2P10696 532 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 ALOX12P18054 663 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 FADDQ13158 208 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 SLC14A1Q13336 389 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 CYP51A1Q16850 503 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 PRSS53Q2L4Q9 553 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 TMEM214Q6NUQ4 689 aaKnown RBP11.43□□□□□ -0.58
CCBE1-203ENST00000589116 ZCCHC8Q6NZY4 707 aaKnown RBP11.43□□□□□ -0.58
CCBE1-203ENST00000589116 RNF111Q6ZNA4 994 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 KANSL1Q7Z3B3 1105 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 OR4N4Q8N0Y3 316 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 OR6C4Q8NGE1 309 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 ZFP28Q8NHY6 868 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 ZCCHC10Q8TBK6 192 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 MAP3K3Q99759 626 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 SLC35A5Q9BS91 424 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 RPF2Q9H7B2 306 aaKnown RBP11.43□□□□□ -0.58
CCBE1-203ENST00000589116 IL21RQ9HBE5 538 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 ZSCAN32Q9NX65 697 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 ATG4BQ9Y4P1 393 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 SLC22A7Q9Y694 548 aa11.43□□□□□ -0.58
CCBE1-203ENST00000589116 A0A1W2PR48 441 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms