RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 PROM1O43490 865 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 CNOT3O75175 753 aaKnown RBP18.45■□□□□ 0.54
CIRBP-220ENST00000588917 DNAJB6O75190 326 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 EEDO75530 441 aaKnown RBP18.45■□□□□ 0.54
CIRBP-220ENST00000588917 TPP2P29144 1249 aaPredicted RBP18.45■□□□□ 0.54
CIRBP-220ENST00000588917 HSD17B7P56937 341 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 TMPRSS3P57727 454 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 C19orf57Q0VDD7 668 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 MAD2L1Q13257 205 aaPredicted RBP18.45■□□□□ 0.54
CIRBP-220ENST00000588917 BIKQ13323 160 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 SMU1Q2TAY7 513 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 MINDY4Q4G0A6 757 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 ATP6AP1LQ52LC2 224 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 MFSD4BQ5TF39 518 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 LRRC34Q8IZ02 419 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 LSM14AQ8ND56 463 aaKnown RBP18.45■□□□□ 0.54
CIRBP-220ENST00000588917 PLPP5Q8NEB5 264 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 SLC39A7Q92504 469 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 MAPKAP1Q9BPZ7 522 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 SOX17Q9H6I2 414 aaPredicted RBP18.45■□□□□ 0.54
CIRBP-220ENST00000588917 MMACHCQ9Y4U1 282 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 ASB4Q9Y574 426 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 KALRNO60229 2985 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 IDSB3KWA1 339 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 CYR61O00622 381 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 EFSO43281 561 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 PCDH7O60245 1069 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 PRMT3O60678 531 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 B4GALT2O60909 372 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 SKAP2O75563 359 aaPredicted RBP18.44■□□□□ 0.54
CIRBP-220ENST00000588917 ANXA4P09525 319 aaPredicted RBP18.44■□□□□ 0.54
CIRBP-220ENST00000588917 PCSK2P16519 638 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 MMP11P24347 488 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 MAPK1P28482 360 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 TIA1P31483 386 aaKnown RBP eCLIP18.44■□□□□ 0.548e-8■■□□□ 14.4
CIRBP-220ENST00000588917 UGT8Q16880 541 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 XKR7Q5GH72 579 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 QSOX2Q6ZRP7 698 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 LAPTM4BQ86VI4 370 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 EFCAB3Q8N7B9 438 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 THAP4Q8WY91 577 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 TANKQ92844 425 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 TUBGCP3Q96CW5 907 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 C11orf24Q96F05 449 aaPredicted RBP18.44■□□□□ 0.54
CIRBP-220ENST00000588917 FAIM2Q9BWQ8 316 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 PRDM9Q9NQV7 894 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 PTPRQQ9UMZ3 2332 aa18.44■□□□□ 0.54
CIRBP-220ENST00000588917 HELZ2Q9BYK8 2649 aaKnown RBP18.43■□□□□ 0.54
CIRBP-220ENST00000588917 LSM1O15116 133 aaKnown RBP18.43■□□□□ 0.54
CIRBP-220ENST00000588917 CTNSO60931 367 aa18.43■□□□□ 0.54
CIRBP-220ENST00000588917 TGDSO95455 350 aa18.43■□□□□ 0.54
CIRBP-220ENST00000588917 GBAP04062 536 aa18.43■□□□□ 0.54
CIRBP-220ENST00000588917 KITP10721 976 aa18.43■□□□□ 0.54
CIRBP-220ENST00000588917 PPP2R1BP30154 601 aa18.43■□□□□ 0.54
CIRBP-220ENST00000588917 MDH1P40925 334 aaKnown RBP18.43■□□□□ 0.54
CIRBP-220ENST00000588917 RPS18P62269 152 aaKnown RBP18.43■□□□□ 0.54
CIRBP-220ENST00000588917 ERV3-1Q14264 604 aa18.43■□□□□ 0.54
CIRBP-220ENST00000588917 HEPACAMQ14CZ8 416 aa18.43■□□□□ 0.54
CIRBP-220ENST00000588917 KIAA0040Q15053 153 aa18.43■□□□□ 0.54
CIRBP-220ENST00000588917 PDCD2Q16342 344 aaPredicted RBP18.43■□□□□ 0.54
CIRBP-220ENST00000588917 NOXRED1Q6NXP6 359 aa18.43■□□□□ 0.54
CIRBP-220ENST00000588917 GPR155Q7Z3F1 870 aa18.43■□□□□ 0.54
CIRBP-220ENST00000588917 PRSS58Q8IYP2 241 aa18.43■□□□□ 0.54
CIRBP-220ENST00000588917 PTCHD1Q96NR3 888 aa18.43■□□□□ 0.54
CIRBP-220ENST00000588917 RPF2Q9H7B2 306 aaKnown RBP18.43■□□□□ 0.54
CIRBP-220ENST00000588917 MEAF6Q9HAF1 191 aa18.43■□□□□ 0.54
CIRBP-220ENST00000588917 LANCL2Q9NS86 450 aa18.43■□□□□ 0.54
CIRBP-220ENST00000588917 C19orf25Q9UFG5 118 aaPredicted RBP18.43■□□□□ 0.54
CIRBP-220ENST00000588917 PSME2Q9UL46 239 aa18.43■□□□□ 0.54
CIRBP-220ENST00000588917 ATG4BQ9Y4P1 393 aa18.43■□□□□ 0.54
CIRBP-220ENST00000588917 MRPS18BQ9Y676 258 aaKnown RBP18.43■□□□□ 0.54
CIRBP-220ENST00000588917 C1orf226A1L170 272 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 FAM227AF5H4B4 570 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 PEX12O00623 359 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 TMPRSS11DO60235 418 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 PEX11AO75192 247 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 ALOX12BO75342 701 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 PRB1P04280 392 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 UMODP07911 640 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 DRD2P14416 443 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 ACPPP15309 386 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 TNFRSF17Q02223 184 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 VAC14Q08AM6 782 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 GALNTL6Q49A17 601 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 RFTN2Q52LD8 501 aaPredicted RBP18.42■□□□□ 0.54
CIRBP-220ENST00000588917 FAM219BQ5XKK7 198 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 SHISA6Q6ZSJ9 500 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 OR2T11Q8NH01 316 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 C3orf30Q96M34 536 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 CATSPER2Q96P56 530 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 NUF2Q9BZD4 464 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 VN1R1Q9GZP7 353 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 CCDC134Q9H6E4 229 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 SLCO1B3Q9NPD5 702 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 PRTFDC1Q9NRG1 225 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 EIF3LQ9Y262 564 aaKnown RBP18.42■□□□□ 0.54
CIRBP-220ENST00000588917 PTGDR2Q9Y5Y4 395 aa18.42■□□□□ 0.54
CIRBP-220ENST00000588917 ATP6AP2A0A1C7CYW4 349 aa18.41■□□□□ 0.54
CIRBP-220ENST00000588917 A0A1W2PR48 441 aa18.41■□□□□ 0.54
CIRBP-220ENST00000588917 TCP11X1B4DZS4 312 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms