RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 FANCEQ9HB96 536 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 SERHLQ9NQF3 203 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 A0A096LPI6 279 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 C15orf38-AP3S2A0A0A6YYH1 394 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 A0A1W2PR48 441 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 RNASET2O00584 256 aaKnown RBP21.07■□□□□ 0.96
ATG4D-209ENST00000588857 PROM1O43490 865 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 ANP32DO95626 131 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 MSL3P1P0C860 447 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 FOLR1P15328 257 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 TRPC1P48995 793 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 DNAJC14Q6Y2X3 702 aaPredicted RBP21.07■□□□□ 0.96
ATG4D-209ENST00000588857 PRSS41Q7RTY9 318 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 ARHGAP22Q7Z5H3 698 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 ARPINQ7Z6K5 226 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 ARHGEF39Q8N4T4 335 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 FAM47BQ8NA70 645 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 DNAJB14Q8TBM8 379 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 ZNF764Q96H86 408 aaPredicted RBP21.07■□□□□ 0.96
ATG4D-209ENST00000588857 SPRTNQ9H040 489 aaPredicted RBP21.07■□□□□ 0.96
ATG4D-209ENST00000588857 LYRM4Q9HD34 91 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 MS4A12Q9NXJ0 267 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 EHD3Q9NZN3 535 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 BTNL2Q9UIR0 455 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 SERTAD3Q9UJW9 196 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 PCDHA9Q9Y5H5 950 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 SPACA6W5XKT8 324 aa21.07■□□□□ 0.96
ATG4D-209ENST00000588857 C1orf226A1L170 272 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 FITM1A5D6W6 292 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 ZNF860A6NHJ4 632 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 SCN2BO60939 215 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 BUD31P41223 144 aaPredicted RBP21.06■□□□□ 0.96
ATG4D-209ENST00000588857 SLC7A2P52569 658 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 EMP3P54852 163 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 RUNX2Q13950 521 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 SPIDRQ14159 915 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 PDSS2Q86YH6 399 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 GPR135Q8IZ08 494 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 FBXW8Q8N3Y1 598 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 EXOSC8Q96B26 276 aaKnown RBP21.06■□□□□ 0.96
ATG4D-209ENST00000588857 MIEF2Q96C03 454 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 CCDC74BQ96LY2 380 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 CCDC115Q96NT0 180 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 CGREF1Q99674 301 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 INPP5KQ9BT40 448 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 NPLQ9BXD5 320 aaPredicted RBP21.06■□□□□ 0.96
ATG4D-209ENST00000588857 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.06■□□□□ 0.96
ATG4D-209ENST00000588857 PCDHGB4Q9UN71 923 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 L3MBTL1Q9Y468 752 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 SCN2AQ99250 2005 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 NTN3O00634 580 aaPredicted RBP21.06■□□□□ 0.96
ATG4D-209ENST00000588857 CIB2O75838 187 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 PDE5AO76074 875 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 CPSF4O95639 269 aaKnown RBP21.06■□□□□ 0.96
ATG4D-209ENST00000588857 AIFM1O95831 613 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 NR2F6P10588 404 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 EFNA1P20827 205 aaPredicted RBP21.06■□□□□ 0.96
ATG4D-209ENST00000588857 CPN2P22792 545 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 SLC6A2P23975 617 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 TLX1P31314 330 aaPredicted RBP21.06■□□□□ 0.96
ATG4D-209ENST00000588857 LIM2P55344 173 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 FOXK2Q01167 660 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 FAM53BQ14153 422 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 MUM1Q2TAK8 710 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 FAM214AQ32MH5 1076 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 PHF19Q5T6S3 580 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 C18orf63Q68DL7 685 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 NANOGP8Q6NSW7 305 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 CLECL1Q8IZS7 167 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 OR9A4Q8NGU2 314 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 CIDECQ96AQ7 238 aaPredicted RBP21.06■□□□□ 0.96
ATG4D-209ENST00000588857 C10orf90Q96M02 699 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 GBP5Q96PP8 586 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 PAIP1Q9H074 479 aaKnown RBP21.06■□□□□ 0.96
ATG4D-209ENST00000588857 NANOGQ9H9S0 305 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 TAS2R7Q9NYW3 318 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 KCMF1Q9P0J7 381 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 TMEM181Q9P2C4 612 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 DAPP1Q9UN19 280 aa21.06■□□□□ 0.96
ATG4D-209ENST00000588857 GLOD5A6NK44 160 aa21.05■□□□□ 0.96
ATG4D-209ENST00000588857 D6RAR5 112 aa21.05■□□□□ 0.96
ATG4D-209ENST00000588857 SGK494L7N484 410 aa21.05■□□□□ 0.96
ATG4D-209ENST00000588857 NVLO15381 856 aaKnown RBP21.05■□□□□ 0.96
ATG4D-209ENST00000588857 PDPK1O15530 556 aa21.05■□□□□ 0.96
ATG4D-209ENST00000588857 HNRNPFP52597 415 aaKnown RBP21.05■□□□□ 0.96
ATG4D-209ENST00000588857 ITGA1P56199 1179 aa21.05■□□□□ 0.96
ATG4D-209ENST00000588857 OLR1P78380 273 aa21.05■□□□□ 0.96
ATG4D-209ENST00000588857 TNFRSF17Q02223 184 aa21.05■□□□□ 0.96
ATG4D-209ENST00000588857 SAMD4BQ5PRF9 694 aaKnown RBP21.05■□□□□ 0.96
ATG4D-209ENST00000588857 LRIF1Q5T3J3 769 aa21.05■□□□□ 0.96
ATG4D-209ENST00000588857 PGM2L1Q6PCE3 622 aa21.05■□□□□ 0.96
ATG4D-209ENST00000588857 RCBTB1Q8NDN9 531 aa21.05■□□□□ 0.96
ATG4D-209ENST00000588857 ENAMQ9NRM1 1142 aa21.05■□□□□ 0.96
ATG4D-209ENST00000588857 FGF21Q9NSA1 209 aa21.05■□□□□ 0.96
ATG4D-209ENST00000588857 VAPAQ9P0L0 249 aa21.05■□□□□ 0.96
ATG4D-209ENST00000588857 C5AR2Q9P296 337 aa21.05■□□□□ 0.96
ATG4D-209ENST00000588857 UTS2RQ9UKP6 389 aa21.05■□□□□ 0.96
ATG4D-209ENST00000588857 PCDHB14Q9Y5E9 798 aa21.05■□□□□ 0.96
ATG4D-209ENST00000588857 CACNA1AO00555 2505 aa21.04■□□□□ 0.96
ATG4D-209ENST00000588857 A0A0A6YYC8 382 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms