RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 NOL6Q9H6R4 1146 aaKnown RBP3.98□□□□□ -1.77
LIG3-211ENST00000588713 RDH14Q9HBH5 336 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 POPDC3Q9HBV1 291 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 CNGB3Q9NQW8 809 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 CHRAC1Q9NRG0 131 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 FAM49BQ9NUQ9 324 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 AIG1Q9NVV5 245 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 FAM118AQ9NWS6 357 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 ZIM2Q9NZV7 527 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 SPASTQ9UBP0 616 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 DNAJB9Q9UBS3 223 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 EGFL7Q9UHF1 273 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 SFMBT1Q9UHJ3 866 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 SH3BGRL2Q9UJC5 107 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 POU2F3Q9UKI9 436 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 FBXO5Q9UKT4 447 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 PLEKHA6Q9Y2H5 1048 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 NTNG1Q9Y2I2 539 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 AAR2Q9Y312 384 aaKnown RBP3.98□□□□□ -1.77
LIG3-211ENST00000588713 DERAQ9Y315 318 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 RBMX2Q9Y388 322 aaKnown RBP3.98□□□□□ -1.77
LIG3-211ENST00000588713 TPRKBQ9Y3C4 175 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 MFHAS1Q9Y4C4 1052 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 TIMM22Q9Y584 194 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 PCDHGA9Q9Y5G4 932 aaKnown RBP3.98□□□□□ -1.77
LIG3-211ENST00000588713 PCDHGA3Q9Y5H0 932 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 SPO11Q9Y5K1 396 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 ORC6Q9Y5N6 252 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 CSNK1G3Q9Y6M4 447 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 MAU2Q9Y6X3 613 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 ABCA4P78363 2273 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 TGP01266 2768 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 ANK2Q01484 3957 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 TRGV8A0A0C4DH27 118 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 PNMA8CA0A1B0GUJ8 204 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 FAM234BA2RU67 622 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 ASPDHA6ND91 283 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 AGAP5A6NIR3 686 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 FADS2P1A8MWK0 482 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 LACTBL1A8MY62 500 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 TMEM229AB2RXF0 380 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 C10orf142B7Z368 130 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 LOC110117498-PIK3R3F6TDL0 507 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 G3V2T6 193 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 FAM229AH3BQW9 127 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 M0R082 166 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 E2F3O00716 465 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 BCKDKO14874 412 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 HAT1O14929 419 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 AZIN1O14977 448 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 PIP5K1BO14986 540 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 SMAD7O15105 426 aaKnown RBP3.97□□□□□ -1.77
LIG3-211ENST00000588713 RAD51BO15315 384 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 PHF1O43189 567 aaPredicted RBP3.97□□□□□ -1.77
LIG3-211ENST00000588713 GREM1O60565 184 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 TRIM3O75382 744 aaPredicted RBP3.97□□□□□ -1.77
LIG3-211ENST00000588713 ANXA9O76027 345 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 KCNK2O95069 426 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 MED26O95402 600 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 CRYZL1O95825 349 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 ANGPTL1O95841 491 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 DLGAP3O95886 979 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 TBX18O95935 607 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 APOA1P02647 267 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 CSF2P04141 144 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 CYBBP04839 570 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 STSP08842 583 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 MTHFD1P11586 935 aaKnown RBP3.97□□□□□ -1.77
LIG3-211ENST00000588713 PRKCAP17252 672 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 NAT1P18440 290 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 GGT1P19440 569 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 CHRM3P20309 590 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 M6PRP20645 277 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 YWHAQP27348 245 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 PKLRP30613 574 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 AKT2P31751 481 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 CD68P34810 354 aaPredicted RBP3.97□□□□□ -1.77
LIG3-211ENST00000588713 HTR7P34969 479 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 TGFBR2P37173 567 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 ETFBP38117 255 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 STAT5AP42229 794 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 MAGEA11P43364 429 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 RPS5P46782 204 aaKnown RBP3.97□□□□□ -1.77
LIG3-211ENST00000588713 RGS7P49802 495 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 METAP1P53582 386 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 GEMP55040 296 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 TAS2R39P59534 338 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 TPI1P60174 286 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 COPZ1P61923 177 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 ERVK-8P63133 956 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 SLC35A2P78381 396 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 RBP5P82980 135 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 TEKQ02763 1124 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 EMX2Q04743 252 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 CHRNB3Q05901 458 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 RIPPLY1Q0D2K3 151 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 TRAF3Q13114 568 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 E2F2Q14209 437 aa3.97□□□□□ -1.77
LIG3-211ENST00000588713 CAPRIN1Q14444 709 aaKnown RBP3.97□□□□□ -1.77
LIG3-211ENST00000588713 ZNF460Q14592 562 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms