RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 DNAJB6O75190 326 aa24.63■■□□□ 1.53
SCAMP4-210ENST00000588555 CPSF4O95639 269 aaKnown RBP24.63■■□□□ 1.53
SCAMP4-210ENST00000588555 RPLP0P05388 317 aaKnown RBP24.63■■□□□ 1.53
SCAMP4-210ENST00000588555 GSK3BP49841 420 aa24.63■■□□□ 1.53
SCAMP4-210ENST00000588555 LIPEQ05469 1076 aa24.63■■□□□ 1.53
SCAMP4-210ENST00000588555 COL9A2Q14055 689 aaPredicted RBP24.63■■□□□ 1.53
SCAMP4-210ENST00000588555 TRIM25Q14258 630 aaKnown RBP24.63■■□□□ 1.53
SCAMP4-210ENST00000588555 KMT5CQ86Y97 462 aa24.63■■□□□ 1.53
SCAMP4-210ENST00000588555 SUMF1Q8NBK3 374 aa24.63■■□□□ 1.53
SCAMP4-210ENST00000588555 IFI44Q8TCB0 444 aa24.63■■□□□ 1.53
SCAMP4-210ENST00000588555 C10orf90Q96M02 699 aa24.63■■□□□ 1.53
SCAMP4-210ENST00000588555 ALG2Q9H553 416 aa24.63■■□□□ 1.53
SCAMP4-210ENST00000588555 PDP2Q9P2J9 529 aa24.63■■□□□ 1.53
SCAMP4-210ENST00000588555 CES1P1Q9UKY3 287 aa24.63■■□□□ 1.53
SCAMP4-210ENST00000588555 DAPP1Q9UN19 280 aa24.63■■□□□ 1.53
SCAMP4-210ENST00000588555 NAALAD2Q9Y3Q0 740 aa24.63■■□□□ 1.53
SCAMP4-210ENST00000588555 C1orf226A1L170 272 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 WASHC1A8K0Z3 465 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 H3BMH7 237 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 PGRMC2O15173 223 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 TOX3O15405 576 aaPredicted RBP24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 MED26O95402 600 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 ANP32DO95626 131 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 CPNE6O95741 557 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 C6orf47O95873 294 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 RETP07949 1114 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 ZCCHC18P0CG32 403 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 LIM2P55344 173 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 PCBP4P57723 403 aaKnown RBP24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 HBA1P69905 142 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 NATD1Q8N6N6 113 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 LRRN3Q9H3W5 708 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 ZNF768Q9H5H4 540 aaKnown RBP24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 SPTBP11277 2137 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 FITM1A5D6W6 292 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 ZNF860A6NHJ4 632 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 DDX5P17844 614 aaKnown RBP24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 NELFEP18615 380 aaKnown RBP24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 GRK6P43250 576 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 DAB2P98082 770 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 CCNIQ14094 377 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 TCTE1Q5JU00 501 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 EXOSC8Q96B26 276 aaKnown RBP24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 COL25A1Q9BXS0 654 aaPredicted RBP24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 TRIM4Q9C037 500 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 PCDHAC1Q9H158 963 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 PHF11Q9UIL8 331 aa24.62■■□□□ 1.53
SCAMP4-210ENST00000588555 RALGAPA1Q6GYQ0 2036 aa24.61■■□□□ 1.53
SCAMP4-210ENST00000588555 A0A1W2PRB8 838 aa24.61■■□□□ 1.53
SCAMP4-210ENST00000588555 GLOD5A6NK44 160 aa24.61■■□□□ 1.53
SCAMP4-210ENST00000588555 PDPK1O15530 556 aa24.61■■□□□ 1.53
SCAMP4-210ENST00000588555 C1QCP02747 245 aa24.61■■□□□ 1.53
SCAMP4-210ENST00000588555 MSL3P1P0C860 447 aa24.61■■□□□ 1.53
SCAMP4-210ENST00000588555 DUSP3P51452 185 aaPredicted RBP24.61■■□□□ 1.53
SCAMP4-210ENST00000588555 GAB1Q13480 694 aa24.61■■□□□ 1.53
SCAMP4-210ENST00000588555 SLC48A1Q6P1K1 146 aa24.61■■□□□ 1.53
SCAMP4-210ENST00000588555 ZNF621Q6ZSS3 439 aa24.61■■□□□ 1.53
SCAMP4-210ENST00000588555 GPR155Q7Z3F1 870 aa24.61■■□□□ 1.53
SCAMP4-210ENST00000588555 OR4A15Q8NGL6 344 aa24.61■■□□□ 1.53
SCAMP4-210ENST00000588555 SH3GL1Q99961 368 aa24.61■■□□□ 1.53
SCAMP4-210ENST00000588555 LYRM4Q9HD34 91 aa24.61■■□□□ 1.53
SCAMP4-210ENST00000588555 GMEB1Q9Y692 573 aa24.61■■□□□ 1.53
SCAMP4-210ENST00000588555 A8MU76 341 aa24.6■■□□□ 1.53
SCAMP4-210ENST00000588555 BCAS2O75934 225 aaPredicted RBP24.6■■□□□ 1.53
SCAMP4-210ENST00000588555 NR2F6P10588 404 aa24.6■■□□□ 1.53
SCAMP4-210ENST00000588555 ARL4DP49703 201 aa24.6■■□□□ 1.53
SCAMP4-210ENST00000588555 OLR1P78380 273 aa24.6■■□□□ 1.53
SCAMP4-210ENST00000588555 TNFRSF17Q02223 184 aa24.6■■□□□ 1.53
SCAMP4-210ENST00000588555 SLC14A1Q13336 389 aa24.6■■□□□ 1.53
SCAMP4-210ENST00000588555 FLOT2Q14254 428 aa24.6■■□□□ 1.53
SCAMP4-210ENST00000588555 INAVAQ3KP66 663 aa24.6■■□□□ 1.53
SCAMP4-210ENST00000588555 OR4D9Q8NGE8 314 aa24.6■■□□□ 1.53
SCAMP4-210ENST00000588555 ZNF583Q96ND8 569 aa24.6■■□□□ 1.53
SCAMP4-210ENST00000588555 THUMPD3Q9BV44 507 aaKnown RBP24.6■■□□□ 1.53
SCAMP4-210ENST00000588555 KAT8Q9H7Z6 458 aaKnown RBP24.6■■□□□ 1.53
SCAMP4-210ENST00000588555 SLC35C2Q9NQQ7 365 aa24.6■■□□□ 1.53
SCAMP4-210ENST00000588555 TAS2R9Q9NYW1 312 aa24.6■■□□□ 1.53
SCAMP4-210ENST00000588555 UTS2RQ9UKP6 389 aa24.6■■□□□ 1.53
SCAMP4-210ENST00000588555 ATP6V1G2O95670 118 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 ANKRD34CP0C6C1 535 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 ZNF806P0C7X5 589 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 TRAP1Q12931 704 aaKnown RBP24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 FXNQ16595 210 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 GARNL3Q5VVW2 1013 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 C10orf111Q8N326 155 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 DTWD1Q8N5C7 304 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 OR5T3Q8NGG3 340 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 SPRTNQ9H040 489 aaPredicted RBP24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 ANKHQ9HCJ1 492 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 VPS4AQ9UN37 437 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 USP22Q9UPT9 525 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 COL5A1P20908 1838 aaPredicted RBP24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 FOXS1O43638 330 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 DNAJA2O60884 412 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 FOLR1P15328 257 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 BUD31P41223 144 aaPredicted RBP24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 FAM53BQ14153 422 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 SF3A2Q15428 464 aaKnown RBP24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 GPR19Q15760 415 aa24.59■■□□□ 1.53
SCAMP4-210ENST00000588555 ARHGAP22Q7Z5H3 698 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms