RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 CDKN2CP42773 168 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 RASSF2P50749 326 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 LIMK1P53667 647 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 KCNJ2P63252 427 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 SHC2P98077 582 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 MAT1AQ00266 395 aaKnown RBP10.68□□□□□ -0.7
VMP1-207ENST00000588131 E2F1Q01094 437 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 NHLH1Q02575 133 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 FOXM1Q08050 763 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 NFYCQ13952 458 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 FAM53BQ14153 422 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 CAPRIN1Q14444 709 aaKnown RBP10.68□□□□□ -0.7
VMP1-207ENST00000588131 TRIP6Q15654 476 aaKnown RBP10.68□□□□□ -0.7
VMP1-207ENST00000588131 MAPKAPK3Q16644 382 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 SYT16Q17RD7 645 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 CDCP2Q5VXM1 449 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 C8orf82Q6P1X6 216 aaPredicted RBP10.68□□□□□ -0.7
VMP1-207ENST00000588131 TLDC1Q6P9B6 456 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 HACD2Q6Y1H2 254 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 DNAJC14Q6Y2X3 702 aaPredicted RBP10.68□□□□□ -0.7
VMP1-207ENST00000588131 TTLL10Q6ZVT0 673 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 DHDDSQ86SQ9 333 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 GLRX5Q86SX6 157 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 SLCO6A1Q86UG4 719 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 GPR135Q8IZ08 494 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 DPP10Q8N608 796 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 BMPERQ8N8U9 685 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 FAM47BQ8NA70 645 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 PCYOX1LQ8NBM8 494 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 TMEM52Q8NDY8 209 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 GTF2H4Q92759 462 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 EXOSC8Q96B26 276 aaKnown RBP10.68□□□□□ -0.7
VMP1-207ENST00000588131 MIEF2Q96C03 454 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 PRPF18Q99633 342 aaKnown RBP10.68□□□□□ -0.7
VMP1-207ENST00000588131 SLC39A3Q9BRY0 314 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 FAIM2Q9BWQ8 316 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 NPLQ9BXD5 320 aaPredicted RBP10.68□□□□□ -0.7
VMP1-207ENST00000588131 CADM1Q9BY67 442 aaKnown RBP10.68□□□□□ -0.7
VMP1-207ENST00000588131 BHLHE41Q9C0J9 482 aaPredicted RBP10.68□□□□□ -0.7
VMP1-207ENST00000588131 C1orf21Q9H246 121 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 LYRM4Q9HD34 91 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 APMAPQ9HDC9 416 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 SLAMF7Q9NQ25 335 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.68□□□□□ -0.7
VMP1-207ENST00000588131 FAM120CQ9NX05 1096 aaKnown RBP10.68□□□□□ -0.7
VMP1-207ENST00000588131 HCN3Q9P1Z3 774 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 DHCR7Q9UBM7 475 aaKnown RBP10.68□□□□□ -0.7
VMP1-207ENST00000588131 PHF11Q9UIL8 331 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 CES1P1Q9UKY3 287 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 MAN2B2Q9Y2E5 1009 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 NEUROG3Q9Y4Z2 214 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 PCDHGA1Q9Y5H4 931 aa10.68□□□□□ -0.7
VMP1-207ENST00000588131 A0A1W2PS29 197 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 C1orf226A1L170 272 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 FAM227AF5H4B4 570 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 DSCR3O14972 297 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 GSC2O15499 205 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 CHST10O43529 356 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 DNAJC8O75937 253 aaPredicted RBP10.67□□□□□ -0.7
VMP1-207ENST00000588131 KRT16P08779 473 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 CCL4P13236 92 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 HOXB9P17482 250 aaPredicted RBP10.67□□□□□ -0.7
VMP1-207ENST00000588131 AVPR1BP47901 424 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 HNRNPFP52597 415 aaKnown RBP10.67□□□□□ -0.7
VMP1-207ENST00000588131 RAB38P57729 211 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 PSME3P61289 254 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 SIM1P81133 766 aaPredicted RBP10.67□□□□□ -0.7
VMP1-207ENST00000588131 DUSP2Q05923 314 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 ACTN3Q08043 901 aaPredicted RBP10.67□□□□□ -0.7
VMP1-207ENST00000588131 FAM214AQ32MH5 1076 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 TRMT5Q32P41 509 aaKnown RBP10.67□□□□□ -0.7
VMP1-207ENST00000588131 GTDC1Q4AE62 458 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 C6orf10Q5SRN2 563 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 SLC48A1Q6P1K1 146 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 DHRS13Q6UX07 377 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 C16orf89Q6UX73 402 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 DLEU7Q6UYE1 221 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 MSANTD1Q6ZTZ1 278 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 MSRB3Q8IXL7 192 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 DEFB107AQ8IZN7 70 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 PGAM4Q8N0Y7 254 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 AGBL5Q8NDL9 886 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.67□□□□□ -0.7
VMP1-207ENST00000588131 PMEPA1Q969W9 287 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 UTP4Q969X6 686 aaKnown RBP10.67□□□□□ -0.7
VMP1-207ENST00000588131 ROPN1LQ96C74 230 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 LRRC58Q96CX6 371 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 MMABQ96EY8 250 aaPredicted RBP10.67□□□□□ -0.7
VMP1-207ENST00000588131 ZNF764Q96H86 408 aaPredicted RBP10.67□□□□□ -0.7
VMP1-207ENST00000588131 ITCHQ96J02 903 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 CTRCQ99895 268 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 GPATCH1Q9BRR8 931 aaKnown RBP10.67□□□□□ -0.7
VMP1-207ENST00000588131 NDC1Q9BTX1 674 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 RBCK1Q9BYM8 510 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 TRIM8Q9BZR9 551 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 PAIP1Q9H074 479 aaKnown RBP10.67□□□□□ -0.7
VMP1-207ENST00000588131 RMND5AQ9H871 391 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 WDR41Q9HAD4 459 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 SLC6A13Q9NSD5 602 aa10.67□□□□□ -0.7
VMP1-207ENST00000588131 ATAD3AQ9NVI7 634 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms