RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 ULK1O75385 1050 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 ERLIN1O75477 346 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 OR4F21O95013 312 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 ESRRBO95718 433 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 UQCRHP07919 91 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 ITGAMP11215 1152 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 TSPAN8P19075 237 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 BSGP35613 385 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 SOX11P35716 441 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 BUD31P41223 144 aaPredicted RBP9.47□□□□□ -0.89
TPM4-207ENST00000588032 NAGLUP54802 743 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 SLC26A5P58743 744 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 TAS2R50P59544 299 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 TLE1Q04724 770 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 STX4Q12846 297 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 TLR1Q15399 786 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 PLEKHN1Q494U1 663 aaPredicted RBP9.47□□□□□ -0.89
TPM4-207ENST00000588032 CFAP157Q5JU67 520 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 ABHD17BQ5VST6 288 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 SLC6A19Q695T7 634 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 MRM1Q6IN84 353 aaKnown RBP9.47□□□□□ -0.89
TPM4-207ENST00000588032 CYP20A1Q6UW02 462 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 RPS27LQ71UM5 84 aaKnown RBP9.47□□□□□ -0.89
TPM4-207ENST00000588032 SRRM1Q8IYB3 904 aaKnown RBP9.47□□□□□ -0.89
TPM4-207ENST00000588032 LGI4Q8N135 537 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 C4orf33Q8N1A6 199 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 TMEM132CQ8N3T6 1108 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 RNF175Q8N4F7 328 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 SLC5A8Q8N695 610 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 CCNYL1Q8N7R7 359 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 GBP7Q8N8V2 638 aaPredicted RBP9.47□□□□□ -0.89
TPM4-207ENST00000588032 FAM47BQ8NA70 645 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 DNAJB14Q8TBM8 379 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 METTL6Q8TCB7 284 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 APOPT1Q96IL0 206 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 MAPKAP1Q9BPZ7 522 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 ALOXE3Q9BYJ1 711 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 RNF32Q9H0A6 362 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 ILKAPQ9H0C8 392 aaPredicted RBP9.47□□□□□ -0.89
TPM4-207ENST00000588032 EPN3Q9H201 632 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 RPF2Q9H7B2 306 aaKnown RBP9.47□□□□□ -0.89
TPM4-207ENST00000588032 WDR41Q9HAD4 459 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 KCNK13Q9HB14 408 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 ADAP2Q9NPF8 381 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 ABI3Q9P2A4 366 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 PTGFRNQ9P2B2 879 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 VTI1BQ9UEU0 232 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 ZNF225Q9UK10 706 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 FBXW2Q9UKT8 454 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 PPIEQ9UNP9 301 aaKnown RBP9.47□□□□□ -0.89
TPM4-207ENST00000588032 MED13Q9UHV7 2174 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 IGSF10Q6WRI0 2623 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 COL6A6A6NMZ7 2263 aa9.47□□□□□ -0.89
TPM4-207ENST00000588032 A0A1B0GTL3 188 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 ARHGAP10A1A4S6 786 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 SERTM1A2A2V5 107 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 A8MUI8 341 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 MANBAO00462 879 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 PROM1O43490 865 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 TRIM13O60858 407 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 SORBS2O94875 1100 aaKnown RBP9.46□□□□□ -0.9
TPM4-207ENST00000588032 ETHE1O95571 254 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 PDYNP01213 254 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 IFNA16P05015 189 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 FAM58BPP0C7Q3 252 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 HMOX2P30519 316 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 DEKP35659 375 aaKnown RBP9.46□□□□□ -0.9
TPM4-207ENST00000588032 CSTF3Q12996 717 aaKnown RBP9.46□□□□□ -0.9
TPM4-207ENST00000588032 ELAVL1Q15717 326 aaKnown RBP9.46□□□□□ -0.9
TPM4-207ENST00000588032 MEP1AQ16819 746 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 SGO1Q5FBB7 561 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 LIPMQ5VYY2 423 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 B3GNTL1Q67FW5 361 aaPredicted RBP9.46□□□□□ -0.9
TPM4-207ENST00000588032 LINC00696Q6ZRV3 163 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 IQCKQ8N0W5 287 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 METTL4Q8N3J2 472 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 SIRT6Q8N6T7 355 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 EFCAB3Q8N7B9 438 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 CDYL2Q8N8U2 506 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 TMEM52Q8NDY8 209 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 NFAM1Q8NET5 270 aaPredicted RBP9.46□□□□□ -0.9
TPM4-207ENST00000588032 B3GNT7Q8NFL0 401 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 ELP5Q8TE02 316 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 SREK1Q8WXA9 508 aaKnown RBP9.46□□□□□ -0.9
TPM4-207ENST00000588032 DAZLQ92904 295 aaKnown RBP9.46□□□□□ -0.9
TPM4-207ENST00000588032 CNDP1Q96KN2 507 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 CSF3RQ99062 836 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 TRMOQ9BU70 441 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 ZNF717Q9BY31 904 aaPredicted RBP9.46□□□□□ -0.9
TPM4-207ENST00000588032 MFRPQ9BY79 579 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 GSTO2Q9H4Y5 243 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 ZBTB20Q9HC78 741 aaPredicted RBP9.46□□□□□ -0.9
TPM4-207ENST00000588032 MID1IP1Q9NPA3 183 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 PNO1Q9NRX1 252 aaKnown RBP9.46□□□□□ -0.9
TPM4-207ENST00000588032 VPS29Q9UBQ0 182 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 SLC12A4Q9UP95 1085 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 ASB4Q9Y574 426 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 CLDN16Q9Y5I7 305 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 CLCA3PQ9Y6N3 262 aa9.46□□□□□ -0.9
TPM4-207ENST00000588032 LOC400499M0QZD8 3231 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms