RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 ZSCAN12O43309 604 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 STK16O75716 305 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 TCP1P17987 556 aaKnown RBP13.12□□□□□ -0.31
ERCC1-205ENST00000587888 IGFBP2P18065 325 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 GSTM2P28161 218 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 MAGEA5P43359 124 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 RNF4P78317 190 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 ID2Q02363 134 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 TFF3Q07654 80 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 TGM3Q08188 693 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 RCN2Q14257 317 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 HIST2H2ACQ16777 129 aaPredicted RBP13.12□□□□□ -0.31
ERCC1-205ENST00000587888 ADPRMQ3LIE5 342 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 HIST2H2AA3Q6FI13 130 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 SPNS3Q6ZMD2 512 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 RTL4Q6ZR62 310 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 RGS9BPQ6ZS82 235 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 FAM47EQ6ZV65 393 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 TMEM200AQ86VY9 491 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 DMRTC2Q8IXT2 367 aaPredicted RBP13.12□□□□□ -0.31
ERCC1-205ENST00000587888 ZBED8Q8IZ13 594 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 KIAA1191Q96A73 305 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 PTCD3Q96EY7 689 aaKnown RBP13.12□□□□□ -0.31
ERCC1-205ENST00000587888 SCYL1Q96KG9 808 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 SMC6Q96SB8 1091 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 MAPKAP1Q9BPZ7 522 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 FAM173AQ9BQD7 235 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 ZNF559Q9BR84 538 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 PITHD1Q9GZP4 211 aaPredicted RBP13.12□□□□□ -0.31
ERCC1-205ENST00000587888 DERL2Q9GZP9 239 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 RHOJQ9H4E5 214 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 ZDHHC11Q9H8X9 412 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 CNOT10Q9H9A5 744 aaKnown RBP13.12□□□□□ -0.31
ERCC1-205ENST00000587888 POPDC3Q9HBV1 291 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 ALKBH4Q9NXW9 302 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 CD274Q9NZQ7 290 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 LIPGQ9Y5X9 500 aa13.12□□□□□ -0.31
ERCC1-205ENST00000587888 ATP6AP2A0A1C7CYW4 349 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 EFCAB8A8MWE9 144 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 RTCAO00442 366 aaKnown RBP13.11□□□□□ -0.31
ERCC1-205ENST00000587888 PHGDHO43175 533 aaKnown RBP13.11□□□□□ -0.31
ERCC1-205ENST00000587888 CCNT2O60583 730 aaKnown RBP13.11□□□□□ -0.31
ERCC1-205ENST00000587888 ZNF354AO60765 605 aaPredicted RBP13.11□□□□□ -0.31
ERCC1-205ENST00000587888 ATP6AP2O75787 350 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 SEC31AO94979 1220 aaKnown RBP13.11□□□□□ -0.31
ERCC1-205ENST00000587888 P04436 131 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 CD22P20273 847 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 MSX1P28360 303 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 GGT5P36269 586 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 MSH2P43246 934 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 KCNC1P48547 511 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 DNASE1L1P49184 302 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 POU4F1Q01851 419 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 OR4D1Q15615 310 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 PDK4Q16654 411 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 NDUFAF5Q5TEU4 345 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 CES4AQ5XG92 561 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 SULT1C3Q6IMI6 304 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 GK5Q6ZS86 529 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 UBE3DQ7Z6J8 389 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 OR4N5Q8IXE1 308 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 TCAIMQ8N3R3 496 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 TMEM251Q8N6I4 163 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 OR5L2Q8NGL0 311 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 OR14A16Q8NHC5 309 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 SLC2A12Q8TD20 617 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 EXT2Q93063 718 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 RUNDC3BQ96NL0 473 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 KCNC2Q96PR1 638 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 TTYH2Q9BSA4 534 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 EHD1Q9H4M9 534 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 LDAHQ9H6V9 325 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 EXO5Q9H790 373 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 IL1RL2Q9HB29 575 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 SMYD2Q9NRG4 433 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 SACM1LQ9NTJ5 587 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 NSMCE4AQ9NXX6 385 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 ACAD8Q9UKU7 415 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 SNX24Q9Y343 169 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 CSMD2Q7Z408 3487 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 EML6Q6ZMW3 1958 aa13.11□□□□□ -0.31
ERCC1-205ENST00000587888 CXorf49A8MYA2 514 aaPredicted RBP13.1□□□□□ -0.31
ERCC1-205ENST00000587888 SAP18O00422 153 aaKnown RBP13.1□□□□□ -0.31
ERCC1-205ENST00000587888 BCKDKO14874 412 aa13.1□□□□□ -0.31
ERCC1-205ENST00000587888 TP73O15350 636 aa13.1□□□□□ -0.31
ERCC1-205ENST00000587888 GLSO94925 669 aaPredicted RBP13.1□□□□□ -0.31
ERCC1-205ENST00000587888 ETHE1O95571 254 aa13.1□□□□□ -0.31
ERCC1-205ENST00000587888 TGFB1P01137 390 aa13.1□□□□□ -0.31
ERCC1-205ENST00000587888 S100BP04271 92 aaPredicted RBP13.1□□□□□ -0.31
ERCC1-205ENST00000587888 HOXD4P09016 255 aaPredicted RBP13.1□□□□□ -0.31
ERCC1-205ENST00000587888 CELA3AP09093 270 aa13.1□□□□□ -0.31
ERCC1-205ENST00000587888 PCNAP12004 261 aa13.1□□□□□ -0.31
ERCC1-205ENST00000587888 CPN2P22792 545 aa13.1□□□□□ -0.31
ERCC1-205ENST00000587888 ATP5A1P25705 553 aaKnown RBP13.1□□□□□ -0.31
ERCC1-205ENST00000587888 ACVR2AP27037 513 aa13.1□□□□□ -0.31
ERCC1-205ENST00000587888 SSTR1P30872 391 aa13.1□□□□□ -0.31
ERCC1-205ENST00000587888 IRF8Q02556 426 aa13.1□□□□□ -0.31
ERCC1-205ENST00000587888 ASPHQ12797 758 aa13.1□□□□□ -0.31
ERCC1-205ENST00000587888 MYBPHQ13203 477 aa13.1□□□□□ -0.31
ERCC1-205ENST00000587888 CHIT1Q13231 466 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms