RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 CHTF18Q8WVB6 975 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 HMGB4Q8WW32 186 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 WFDC12Q8WWY7 111 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 RLN3Q8WXF3 142 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 NMD3Q96D46 503 aaKnown RBP5.5□□□□□ -1.53
SDF2-206ENST00000587788 COQ8BQ96D53 544 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 NUS1Q96E22 293 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 C11orf24Q96F05 449 aaPredicted RBP5.5□□□□□ -1.53
SDF2-206ENST00000587788 APIPQ96GX9 242 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 MRGPRX1Q96LB2 322 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 TSSK3Q96PN8 268 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 PANX1Q96RD7 426 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 UBL7Q96S82 380 aaPredicted RBP5.5□□□□□ -1.53
SDF2-206ENST00000587788 PKP4Q99569 1192 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 WRAP53Q9BUR4 548 aaKnown RBP5.5□□□□□ -1.53
SDF2-206ENST00000587788 SGPP1Q9BX95 441 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 TEX101Q9BY14 249 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 PITHD1Q9GZP4 211 aaPredicted RBP5.5□□□□□ -1.53
SDF2-206ENST00000587788 MKRN2Q9H000 416 aaKnown RBP5.5□□□□□ -1.53
SDF2-206ENST00000587788 BTBD1Q9H0C5 482 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 PCBD2Q9H0N5 130 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 GABARAPL1Q9H0R8 117 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 ING2Q9H160 280 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 PCED1AQ9H1Q7 454 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 TM9SF3Q9HD45 589 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 IL1RAPQ9NPH3 570 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 AASDHPPTQ9NRN7 309 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 AHSPQ9NZD4 102 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 ATP6V1HQ9UI12 483 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 CD84Q9UIB8 345 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 VPS4AQ9UN37 437 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 PCDHGB4Q9UN71 923 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 NEUROG3Q9Y4Z2 214 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 PCDHGB5Q9Y5G0 923 aa5.5□□□□□ -1.53
SDF2-206ENST00000587788 FRYLO94915 3013 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 A0A1W2PQU0 124 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 MGAT4DA6NG13 374 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 OR2AG2A6NM03 316 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 E7EQ34 232 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 H3BSA7 217 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 PLOD2O00469 737 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 SCAMP2O15127 329 aaKnown RBP5.49□□□□□ -1.53
SDF2-206ENST00000587788 E2F6O75461 281 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 OR6B1O95007 311 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 KCNK5O95279 499 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 C1orf105O95561 183 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 SNAP29O95721 258 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 SLC16A8O95907 504 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 SERPINA1P01009 418 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 CCDC159P0C7I6 412 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 C1GALT1C1LP0DN25 315 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 ITGAMP11215 1152 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 ENGP17813 658 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 CXCR2P25025 360 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 DCKP27707 260 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 IMPA1P29218 277 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 TIA1P31483 386 aaKnown RBP eCLIP5.49□□□□□ -1.53
SDF2-206ENST00000587788 KDELR2P33947 212 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 DCTP40126 519 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 CCR5P51681 352 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 TMBIM6P55061 237 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 TPD52P55327 224 aaPredicted RBP5.49□□□□□ -1.53
SDF2-206ENST00000587788 TAS2R38P59533 333 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 YBX1P67809 324 aaKnown RBP5.49□□□□□ -1.53
SDF2-206ENST00000587788 PHC1P78364 1004 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 PPP2R2BQ00005 443 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 RBBP4Q09028 425 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 CYP2A13Q16696 494 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 ZXDCQ2QGD7 858 aaPredicted RBP5.49□□□□□ -1.53
SDF2-206ENST00000587788 POM121L1PQ3SYA9 428 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.49□□□□□ -1.53
SDF2-206ENST00000587788 OTUD3Q5T2D3 398 aaPredicted RBP5.49□□□□□ -1.53
SDF2-206ENST00000587788 BROXQ5VW32 411 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 FAM219BQ5XKK7 198 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 RAET1GQ6H3X3 334 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 OR4F3Q6IEY1 312 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 ZCCHC8Q6NZY4 707 aaKnown RBP5.49□□□□□ -1.53
SDF2-206ENST00000587788 ZC3H14Q6PJT7 736 aaKnown RBP5.49□□□□□ -1.53
SDF2-206ENST00000587788 DOK6Q6PKX4 331 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 ENPP6Q6UWR7 440 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 ZNF621Q6ZSS3 439 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 TMEM26Q6ZUK4 368 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 EIF3MQ7L2H7 374 aaKnown RBP5.49□□□□□ -1.53
SDF2-206ENST00000587788 TRIM69Q86WT6 500 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 DCP2Q8IU60 420 aaKnown RBP5.49□□□□□ -1.53
SDF2-206ENST00000587788 CROCCP3Q8IVE0 287 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 ZDHHC21Q8IVQ6 265 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 ZC3H7AQ8IWR0 971 aaKnown RBP5.49□□□□□ -1.53
SDF2-206ENST00000587788 SYTL1Q8IYJ3 562 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 KRT78Q8N1N4 520 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 DENND6BQ8NEG7 585 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 CADM4Q8NFZ8 388 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 OR7G3Q8NG95 312 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 OR2L2Q8NH16 312 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 GOT1L1Q8NHS2 421 aaPredicted RBP5.49□□□□□ -1.53
SDF2-206ENST00000587788 CLHC1Q8NHS4 586 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 NETO1Q8TDF5 533 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 GAB3Q8WWW8 586 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 SNX19Q92543 992 aa5.49□□□□□ -1.53
SDF2-206ENST00000587788 RAD51AP1Q96B01 352 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms