RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 CCDC166P0CW27 439 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 SOX3P41225 446 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 CBLBQ13191 982 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 BMPR2Q13873 1038 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 PDK4Q16654 411 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 EMC4Q5J8M3 183 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 SULT1C3Q6IMI6 304 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 ARHGAP11AQ6P4F7 1023 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 IL20RBQ6UXL0 311 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 MEX3BQ6ZN04 569 aaKnown RBP13□□□□□ -0.33
ATG4D-206ENST00000586863 ZNF793Q6ZN11 406 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 CEP128Q6ZU80 1094 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 UBE3DQ7Z6J8 389 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 TMEM132CQ8N3T6 1108 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 PDPRQ8NCN5 879 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 PTPMT1Q8WUK0 201 aaPredicted RBP13□□□□□ -0.33
ATG4D-206ENST00000586863 ASB15Q8WXK1 588 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 EXT2Q93063 718 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 WDR34Q96EX3 536 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 PTCD3Q96EY7 689 aaKnown RBP13□□□□□ -0.33
ATG4D-206ENST00000586863 C14orf79Q96F83 325 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 RASL10BQ96S79 203 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 GPR22Q99680 433 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 TREX2Q9BQ50 279 aaPredicted RBP13□□□□□ -0.33
ATG4D-206ENST00000586863 CAPS2Q9BXY5 557 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 DEFB127Q9H1M4 99 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 CNOT10Q9H9A5 744 aaKnown RBP13□□□□□ -0.33
ATG4D-206ENST00000586863 COPS7BQ9H9Q2 264 aaPredicted RBP13□□□□□ -0.33
ATG4D-206ENST00000586863 PRDM7Q9NQW5 492 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 COQ3Q9NZJ6 369 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 MYOTQ9UBF9 498 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 ITGB1BP2Q9UKP3 347 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 CLCA3PQ9Y6N3 262 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 NCKAP5O14513 1909 aa13□□□□□ -0.33
ATG4D-206ENST00000586863 FAM166BA8MTA8 275 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 G3V3Y1 287 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 KIF2AO00139 706 aaPredicted RBP12.99□□□□□ -0.33
ATG4D-206ENST00000586863 RTCAO00442 366 aaKnown RBP12.99□□□□□ -0.33
ATG4D-206ENST00000586863 ZNF354AO60765 605 aaPredicted RBP12.99□□□□□ -0.33
ATG4D-206ENST00000586863 CTNSO60931 367 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 LDB3O75112 727 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 C1QAP02745 245 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 HPDP32754 393 aaPredicted RBP12.99□□□□□ -0.33
ATG4D-206ENST00000586863 HK2P52789 917 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 ID2Q02363 134 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 TLE4Q04727 773 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 ZKSCAN8Q15776 578 aaPredicted RBP12.99□□□□□ -0.33
ATG4D-206ENST00000586863 CDKL4Q5MAI5 379 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 HSDL2Q6YN16 418 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 GPALPP1Q8IXQ4 340 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 OR2M7Q8NG81 312 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 OR14A16Q8NHC5 309 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 PYROXD1Q8WU10 500 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 CHTF18Q8WVB6 975 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 DAZLQ92904 295 aaKnown RBP12.99□□□□□ -0.33
ATG4D-206ENST00000586863 TSPAN17Q96FV3 270 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 RBBP8Q99708 897 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 MAPKAP1Q9BPZ7 522 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 EFCAB11Q9BUY7 163 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 MS4A8Q9BY19 250 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 ALOXE3Q9BYJ1 711 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 OR8D2Q9GZM6 311 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 TP63Q9H3D4 680 aaPredicted RBP12.99□□□□□ -0.33
ATG4D-206ENST00000586863 SAYSD1Q9NPB0 183 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 NPDC1Q9NQX5 325 aaPredicted RBP12.99□□□□□ -0.33
ATG4D-206ENST00000586863 CD274Q9NZQ7 290 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 VTI1BQ9UEU0 232 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 PTBP2Q9UKA9 531 aaKnown RBP12.99□□□□□ -0.33
ATG4D-206ENST00000586863 LIPGQ9Y5X9 500 aa12.99□□□□□ -0.33
ATG4D-206ENST00000586863 NF1P21359 2839 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 TCRBV9S1A1TA0A576 114 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 NKX2-6A6NCS4 301 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 FAM90A27PA6NNH2 459 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 C17orf105B2RV13 164 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 ZNF500O60304 480 aaPredicted RBP12.98□□□□□ -0.33
ATG4D-206ENST00000586863 CCNT2O60583 730 aaKnown RBP12.98□□□□□ -0.33
ATG4D-206ENST00000586863 SH3BGRLO75368 114 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 GLSO94925 669 aaPredicted RBP12.98□□□□□ -0.33
ATG4D-206ENST00000586863 STMN1P16949 149 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 IGFBP2P18065 325 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 MSH2P43246 934 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 KCNC1P48547 511 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 ATP6V0D1P61421 351 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 PPIAP62937 165 aaKnown RBP12.98□□□□□ -0.33
ATG4D-206ENST00000586863 PLGLB1Q02325 96 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 IRF8Q02556 426 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 TFF3Q07654 80 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 TGM3Q08188 693 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 STX4Q12846 297 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 CHIT1Q13231 466 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 RCN2Q14257 317 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 EFTUD2Q15029 972 aaKnown RBP eCLIP12.98□□□□□ -0.335e-7■■□□□ 11.5
ATG4D-206ENST00000586863 ZNF750Q32MQ0 723 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 MORN4Q8NDC4 146 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 SLC2A12Q8TD20 617 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 ZNF473Q8WTR7 871 aaKnown RBP12.98□□□□□ -0.33
ATG4D-206ENST00000586863 ZNF592Q92610 1267 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 CDKL2Q92772 493 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 SCYL1Q96KG9 808 aa12.98□□□□□ -0.33
ATG4D-206ENST00000586863 UBXN10Q96LJ8 280 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms