RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 ANKRD46Q86W74 232 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 EID3Q8N140 333 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 FAM47BQ8NA70 645 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 CAMKVQ8NCB2 501 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 ZNF548Q8NEK5 533 aaPredicted RBP9.88□□□□□ -0.83
LIG3-203ENST00000585370 OR4A15Q8NGL6 344 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 FLVCR1-AS1Q8TAF5 88 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 SLC37A2Q8TED4 501 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 NUDT8Q8WV74 236 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 CANT1Q8WVQ1 401 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 OR5P2Q8WZ92 322 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 RSC1A1Q92681 617 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 GAL3ST3Q96A11 431 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 MIEF2Q96C03 454 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 MS4A6EQ96DS6 147 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 ZNF184Q99676 751 aaPredicted RBP9.88□□□□□ -0.83
LIG3-203ENST00000585370 NRTNQ99748 197 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 ZNF717Q9BY31 904 aaPredicted RBP9.88□□□□□ -0.83
LIG3-203ENST00000585370 SLC6A16Q9GZN6 736 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 ABCG4Q9H172 646 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 TCEAL2Q9H3H9 227 aaPredicted RBP9.88□□□□□ -0.83
LIG3-203ENST00000585370 ERVMER34-1Q9H9K5 563 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 COPS7BQ9H9Q2 264 aaPredicted RBP9.88□□□□□ -0.83
LIG3-203ENST00000585370 TPT1P8Q9HAU6 139 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 PRDM9Q9NQV7 894 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 ACSS1Q9NUB1 689 aaPredicted RBP9.88□□□□□ -0.83
LIG3-203ENST00000585370 OLAHQ9NV23 265 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 HRASLS2Q9NWW9 162 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 LYARQ9NX58 379 aaKnown RBP9.88□□□□□ -0.83
LIG3-203ENST00000585370 TAS2R9Q9NYW1 312 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 ANAPC2Q9UJX6 822 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 EXO1Q9UQ84 846 aaKnown RBP9.88□□□□□ -0.83
LIG3-203ENST00000585370 BTBD3Q9Y2F9 522 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 SNX11Q9Y5W9 270 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 PTPRBP23467 1997 aa9.88□□□□□ -0.83
LIG3-203ENST00000585370 A0A0A6YYD5 115 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 A0A0J9YY10 115 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 A0A1W2PRB8 838 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 TCRBV5S2A0A599 114 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 GSAPA4D1B5 854 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 LMO7DNF2Z398 122 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 CXCR6O00574 342 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 TXNDC9O14530 226 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 WNT1P04628 370 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 SERPIND1P05546 499 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 GSNP06396 782 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 FAM58BPP0C7Q3 252 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 SLC35G6P0C7Q6 338 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 BMP2P12643 396 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 POLR2CP19387 275 aaPredicted RBP9.87□□□□□ -0.83
LIG3-203ENST00000585370 HIST1H1TP22492 207 aaPredicted RBP9.87□□□□□ -0.83
LIG3-203ENST00000585370 FASP25445 335 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 CDKN2CP42773 168 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 HSPA13P48723 471 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 C21orf59P57076 290 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 CHRNB3Q05901 458 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 RBBP4Q09028 425 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 FADDQ13158 208 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 VEZF1Q14119 521 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 ZNF542PQ5EBM4 170 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 TOR1AIP1Q5JTV8 583 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 TBCELQ5QJ74 424 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.87□□□□□ -0.83
LIG3-203ENST00000585370 FBXO42Q6P3S6 717 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 ABHD17CQ6PCB6 329 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 OGFOD3Q6PK18 319 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 UBE3DQ7Z6J8 389 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 ASPGQ86U10 573 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 MARCH9Q86YJ5 346 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 TICAM1Q8IUC6 712 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 SLC30A8Q8IWU4 369 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 ADGRG5Q8IZF4 528 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 DTWD1Q8N5C7 304 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 RHBDD1Q8TEB9 315 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 ZFP90Q8TF47 636 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 SLCO4A1Q96BD0 722 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 TM4SF19Q96DZ7 209 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 NAF1Q96HR8 494 aaKnown RBP9.87□□□□□ -0.83
LIG3-203ENST00000585370 BTBD9Q96Q07 612 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 LRRC61Q9BV99 259 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 NLNQ9BYT8 704 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 MAGIXQ9H6Y5 334 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 PRDM7Q9NQW5 492 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 RIMS3Q9UJD0 308 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 PSME2Q9UL46 239 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 LHX6Q9UPM6 363 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 CSNK1G3Q9Y6M4 447 aa9.87□□□□□ -0.83
LIG3-203ENST00000585370 C1orf226A1L170 272 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 OR5K3A6NET4 321 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 LILRA5A6NI73 299 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 ZSCAN9O15535 394 aaPredicted RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 FLRT2O43155 660 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 AQP9O43315 295 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 ERI3O43414 337 aaKnown RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 CREG1O75629 220 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 GBAP04062 536 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 UQCRC2P22695 453 aa9.86□□□□□ -0.83
LIG3-203ENST00000585370 ATP5A1P25705 553 aaKnown RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 FRKP42685 505 aaPredicted RBP9.86□□□□□ -0.83
LIG3-203ENST00000585370 PLA2G16P53816 162 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms